Gene YpsIP31758_2486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2486 
Symbol 
ID5388532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand- 
Start bp2809545 
End bp2809997 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content55% 
IMG OID640865477 
Producthypothetical protein 
Protein accessionYP_001401455 
Protein GI153947844 
COG category[S] Function unknown 
COG ID[COG3518] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03357] type VI secretion system lysozyme-related protein 


Plasmid Coverage information

Num covering plasmid clones68 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGGACA CCTCCTCGCC ATCGTTGTAT GAGCAATTGT TGGGCAATTT CACCGGCGGG 
CTTGACCTGC ATCAGGTCAG TGACGAAAAC CAGGTCATTC TCTCGGTGCT GGACAATATG 
CAACGCATTC TTAATTGTCG GGCCGGAACA CTCAGTCATC TGCCCGATTA TGGCCTGCCG 
GACATGAGTA AAATTCTGCA GGGGTTGCCG GGCAGCGCGC ATTCGCTGCT GACCACGCTG 
TCCGCCACCT TGCTGAAATA CGAGCCGCGT CTGAAAAGTT TGCAGGTGAT TCTGTTGCCA 
CAGACCACAC CCGGTCATCT GGAATACGCC ATTGATGCGG AGCTGAAAGG GCTGGGACTG 
GTGCGCTATG GCACGGCGTT TATGCCGGAG GGCAGGGTGT TGATGCGCCA CCTTAAACAA 
CAACACTACC TCAATCAGCG GGAGTCATTT TGA
 
Protein sequence
MPDTSSPSLY EQLLGNFTGG LDLHQVSDEN QVILSVLDNM QRILNCRAGT LSHLPDYGLP 
DMSKILQGLP GSAHSLLTTL SATLLKYEPR LKSLQVILLP QTTPGHLEYA IDAELKGLGL 
VRYGTAFMPE GRVLMRHLKQ QHYLNQRESF