Gene YpsIP31758_2478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2478 
Symbol 
ID5387604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand+ 
Start bp2799535 
End bp2800203 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content38% 
IMG OID640865469 
ProductABC transporter ATP-binding protein 
Protein accessionYP_001401447 
Protein GI153949262 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value0.866087 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTACATT TACAGAATGC AAAAAAATAT TACACAACAA AAGTCATAAA AACCAGAGTC 
CTAAATAATA TAACGCTTTC TGTAGAGAAA GGAGAGTTTG TTTCTATCAT GGGGCCATCA 
GGATCAGGTA AATCAACACT ACTCAATATT GTCGGCATGT TTGAATCCTT GGATTCCGGA 
TCGCTTACGT TGGCCGGAAA ACATGTTGAT AACCTGGGTT ACTCTCAACG GATCACATTA 
AGGCGCGAAT TAATAGGGTA TATATTTCAA TCATTTAATC TTATCCCACA TTTATCAATA 
TTTGATAATG TCGAGTTGCC GTTGAAATAT CGTGGGGTCG CTAAAAAAGA CCGTATTGAG 
CAAGTAAATC AAATTTTGAA CCTTTTGGGG ATCGATAACC GAAAAAACCA TAAACCCATG 
CAATTATCAG GTGGTCAACA ACAACGTGTG GCCATTGCCA GAGCGATGGT AACTTGTCCC 
GCATTAATAT TGGCTGATGA GCCTACCGGT AATTTAGACA GTAAGAATGC TCGAGCGGTA 
CTTGAGCAAT TAAAAGCAAT AAACCAGTCA GGGACTACCA TCATCATGGT CACACACTCA 
GATGAAGCGT CAAGTTATAG TAATAGAATA CTCAACATGA AAGATGGGAA TATTAACATG 
AAAAAATAG
 
Protein sequence
MLHLQNAKKY YTTKVIKTRV LNNITLSVEK GEFVSIMGPS GSGKSTLLNI VGMFESLDSG 
SLTLAGKHVD NLGYSQRITL RRELIGYIFQ SFNLIPHLSI FDNVELPLKY RGVAKKDRIE 
QVNQILNLLG IDNRKNHKPM QLSGGQQQRV AIARAMVTCP ALILADEPTG NLDSKNARAV 
LEQLKAINQS GTTIIMVTHS DEASSYSNRI LNMKDGNINM KK