Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2477 |
Symbol | |
ID | 5387536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 2798271 |
End bp | 2799533 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640865468 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_001401446 |
Protein GI | 153948431 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATATAA AATTAGAAAA AAAGATAAAT ATCAACAGTA GAGAGAAAAT AGTTATAATT TTCGTGTTGC TTATTCTATT TTTAAGCTGT TTCTTTATTT ATTATTTATT CACCAAAGAA AGCGCCCTGC TCGTTCCTCG AGAAAGAGCC ATATTCTATA CTGCTCAATT TGAGCCATAT CAAGACGTAT TGGTGACACG CGCCATTACG GTACCTAATG AAAGTGTTAT TTTATCAAGT GAAAGAGGAG GTAAGATTAT TGAAATAGTC AAGCAATCTG CTGAAAATGT GATAAAAGGC GATGTGATTG CTCGATTATC TAATTATGAC TTCACACTAG AAGCCACATC CAGAATGGCG GATATTATGG AGCAAATAAA TAGCCTCCGT AATATGAGAA TGAGATTAGA ACAAGATAGC AGAGATACTC AACTCAGTTT GCAAGAAGCT CAACACCAGA TAGATATAAT TTCTAAAGAT TTGAGAAGAT ATAAAATACT TGACAAAAAA TTCTTGATTG CAAAGTCTGA ACTAGAACGA CAGGCCGATA GACTAATAAA TTGGAAAGTT AAGAGTGATA TACTACAAAA ACACAATAGT AGGAACAAAA AATCATTCCC TTCTCAATTT AAAAACATAG ATGAATCTAT TATATTACTT GAAAAAATGA TGAAAATGAT TGAAGTTGGC ATTGAGCAAC TCGTTATTAT TGCACCTATT GATGGTACAT TATCTGTTCT TGATATTGAA TTAGGTCAAC AAATAAAATC AGGCGAAAAA ATATCAGTAA TAGACAATTT AAATTCATAT TATTTCAATG TTTATTTCAG TGAATATTAT ATCGATAAGA TAAAACCTAA TACTCAAATT ATCGCACAGA TAAATGGTCA AGATACTCAA CTACTGATAG AGTCAGTATC AGCAATAGTA GACAATGGAA AATTCAAAGC AAAGCTTAGG CCAATTGAAT CAGGCATCGC TCATCTTAAA CGAGGGCAAT CTATTGAAAT TCGTATTGCA CTACAAGAAG AAAATAATCA CGTACTATTA GTCCCAACTG AAAGTGTGTT TTCAAATAGC AATGGTGACC ATTTTATATA TATTTATCAA GATAAATATG ACCGTGCAAT TAAAACAAAA GTTGAAGTTA AACGTCGAAA TTCGATTAAA ACAGAGATCA CATCTGGATT ACAGCCAAGT CAACGCATTG TAAAAATGCC TGATGATAGT GATAAAACAG CAAATATCAT AGAGTTTAAA TAA
|
Protein sequence | MDIKLEKKIN INSREKIVII FVLLILFLSC FFIYYLFTKE SALLVPRERA IFYTAQFEPY QDVLVTRAIT VPNESVILSS ERGGKIIEIV KQSAENVIKG DVIARLSNYD FTLEATSRMA DIMEQINSLR NMRMRLEQDS RDTQLSLQEA QHQIDIISKD LRRYKILDKK FLIAKSELER QADRLINWKV KSDILQKHNS RNKKSFPSQF KNIDESIILL EKMMKMIEVG IEQLVIIAPI DGTLSVLDIE LGQQIKSGEK ISVIDNLNSY YFNVYFSEYY IDKIKPNTQI IAQINGQDTQ LLIESVSAIV DNGKFKAKLR PIESGIAHLK RGQSIEIRIA LQEENNHVLL VPTESVFSNS NGDHFIYIYQ DKYDRAIKTK VEVKRRNSIK TEITSGLQPS QRIVKMPDDS DKTANIIEFK
|
| |