| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2448 |
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| Symbol | |
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| ID | 5388560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 2761191 |
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| End bp | 2762738 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640865439 |
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| Product | pyridoxal-dependent decarboxylase domain-containing protein |
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| Protein accession | YP_001401417 |
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| Protein GI | 153947676 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACAAAG ATATCTATGA GGAAAACCAT TTTATAGATC AAGGTAATGA TATAACTGAT
GTGCTTTGTT TAGGAAACTT CTTAAATAAA GATAGCGCTG AACACTATTA TGAGAGCGTG
AATAATATCA CTGCAAGGAT TAAGGCTATA TTCACCCTGG TAGATAAACC TTTTAGCGGG
ATATTACCCT CTGAACTATC ACCTGATTTT TATTGTATTG ATTTAAATCA GCCACTAACG
TCATTGGATA GCGCATTAGA TGAATTACAG CAGCTATATA TTAAGGATGC TATATACTTT
CATCACCCTA AATATGTTGC GCATCTTAAT TGCCCGGTTG TTCTCCCTGC AGTTCTGGCA
GAAAGCATTA TTAGTGCCCT TAATTCTTCG TTGGATACCT GGGATCAAAG TGCCGGTGCG
ACCTTAATTG AGCAGAAAGT TCTGGATTGG ACCCGCGATA AAATGGCCCT AGGTAGCCAG
GGCGACGGTA TTTTCACCAG CGGTGGAACA CAGTCAAATC TTATGGCGAT ACTGCTGGCC
CGTGATCATT TTTGCCACCA ACGTGATGCT AACCACCAGA ATAAATTGCA GGGATTACCC
GCTGATTCTC ATAAATTTCG TATCTTTACT TCGGTGGTTA GCCATTTCAG TACACAAAAA
GCCGCAGCAC TATTGGGCCT TGGCTATAAC GCGGTTGTTG CCGTGCCCTA TGACAGTGAA
TTCAAGATGG ATGCGCAGGC ATTGGATCAA AGCATTGCGC TCTGTTTATC ACAAGGCAAT
ATTCCCTTAG CCATTGTTGC TACCACCGGA ACGACTGACT TTGGCAGTAT TGACCCCTTG
CACGCTATTT CGACGTTGGC CAAACAGTAC GGTCTTTGGT TACATGTGGA TGCTGCCTAC
GGCTGTGGCC TATTAGTTTC CTCACACTAT GAACAGCTAC TTTCCGGTAT TGAAATGGCT
GATTCTGTGA CGGTGGATTA TCACAAGTCC TTTTTTCAAC CGGTAAGTTG CAGTGCTTTT
TTTGTTAAAG ATAAACAGCA TTTTTCTTAT CTGACTTATC ACGCGGAATA CCTCAATCCA
TTAAGTGCAT CACTGGAAGG TACGCCGAAT TTAGTGAACA AAAGTATTCA GACCACCCGT
CGCTTTGATG CGCTAAAGCT GTGGTTAACG CTACGGATTA TGGGAGCCAA ACAGCTTGGT
TTGGCTTTTG AACATGTTAT GGATACGGCA CAGCAGGCTT ATCAACTTAT GTTGCCTAAT
CCGTATTTTG AACTAATACA TCGCCCGGTA TTAAGCACGC TGGTATTTCG TTTTATGCCG
GAACAGCCTC GCAGCGATGA CGATATTGAT CGAACCAATG CCTATATTCG CAAAGCGTTA
TTCCGTGAGG GGCATACGGT TATTGCAGGT ACCAAAGTAA ATGGTAAACA GTATTTGAAA
TTTACCTTCC TTAATCCGAC GACCACACTC CAGCACCTGA ACGAAATTGT GGATGCCATT
ATTACCGAGG GTAAAAACTA TCCGACTCTC TATAACAGTC AATCATGA
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| Protein sequence | MYKDIYEENH FIDQGNDITD VLCLGNFLNK DSAEHYYESV NNITARIKAI FTLVDKPFSG
ILPSELSPDF YCIDLNQPLT SLDSALDELQ QLYIKDAIYF HHPKYVAHLN CPVVLPAVLA
ESIISALNSS LDTWDQSAGA TLIEQKVLDW TRDKMALGSQ GDGIFTSGGT QSNLMAILLA
RDHFCHQRDA NHQNKLQGLP ADSHKFRIFT SVVSHFSTQK AAALLGLGYN AVVAVPYDSE
FKMDAQALDQ SIALCLSQGN IPLAIVATTG TTDFGSIDPL HAISTLAKQY GLWLHVDAAY
GCGLLVSSHY EQLLSGIEMA DSVTVDYHKS FFQPVSCSAF FVKDKQHFSY LTYHAEYLNP
LSASLEGTPN LVNKSIQTTR RFDALKLWLT LRIMGAKQLG LAFEHVMDTA QQAYQLMLPN
PYFELIHRPV LSTLVFRFMP EQPRSDDDID RTNAYIRKAL FREGHTVIAG TKVNGKQYLK
FTFLNPTTTL QHLNEIVDAI ITEGKNYPTL YNSQS
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