Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2439 |
Symbol | |
ID | 5384490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 2748982 |
End bp | 2750796 |
Gene Length | 1815 bp |
Protein Length | 604 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640865430 |
Product | IucA/IucC family siderophore biosynthesis protein |
Protein accession | YP_001401408 |
Protein GI | 153950530 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4264] Siderophore synthetase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTTCAC AACGTCAATT CAATGAAAAT AATATCCAAC ATCTTAATGG TGAAAATTGG TCTCATGCCA ATGCACATTT AGTAGGGAAA ATACTGCGTG AACTGACTCA TGAGAAATTG ATTGCCCCAG TCTGCTTGGT TACACCAGAG GATGGCTATC ACCACTATAG CTTCACTCCA GACCAAGACC GAATAGAATA CCTTTTTAAA GCAAAATGTT ATCAACTTGA CCACCTGGAT ATTGACCCAA GCACCTTAAC CAAAACCCTT GATGGGCACG CGCAGCTACT GGATGCATTA CAGCTGATTA TTGAATTAAA CAACCGGCTT GGTATCTCAG AAGAAATGCT GCCCGTCTAT TTGGATGAAA TCTCCAGTAC CCTTTATGGT TACGCTTTTA AGTATCATCA TAATAACCTT AGCGCCACGC AATTGGTTCA CGCCAATTAC CAAACTGTAG AAACAGCGAT GAGCGAGGGC CACCCCGTTT TTATCGCGAA TAATGGCCGT ATTGGTTTTG ATATTACAGA CTACGCTGCC TATGCACCAG AAAGCGCCCA TCCAATTAAT TTAATCTGGA TCGCAGTGCA TCAGGATAAA ACCGTATTTT CCAGTTTTAC CGGCCTTAGC TACCCACAAT TAATGCAGGA GGAGTTGGGC GATTACCAAT GGGAACAGTT TACTCAGTAT TTAACTTCTC GCGGGTTGAC CGCCCAAGAT TATTTCTTTA TGCCCCTGCA CCCCTGGCAA TGGCATGAAA GGATTGCCAC CAGCTTTGCT GCAGATATTG CACGTAACGA TATTATTTAT TTAGGACAAG GGCAAGATAG TTATCTGGCT CAACAATCCA TTCGAACGTT TTTCAATCTC TCTAATCCAC ACAAAAATTA TGTTAAGACG GCATTATCTA TTTTGAATAT GGGCTTTATG CGCGGGCTTT CCCCCCATAG CATGGTAACC ACGCCATTGG TTAATGAATG GCTTAGCGAT TTAATTAAGC AAGATACTTT CTTTCAGCAG AAGAAATTTA CCTTACTCTG CGAAAGAGCC GCCATGGGGT ATTTCAACCC CCATTTTGAA ACCGCTTTAA TTAAAGATAA TCCCCATAAA AAAATGCTCT CGGCCCTGTG GCGAGAAAGC CCTATGCCAA AACTTGCTGG CCACCAGCGT TTAATGACGA TGGCCTCTTT ACTGCACAGC GATAATGCCG GTAATTCGGT AGTCTCCGCC TTGGTACACT CATCGGGGTT AAGTGCAAAG GCATGGATAA CACACTATCT GGATGCCTAT CTTTCGCCTC TATTACACGC CTTCTTTACT TACGACTTGG TATTTATGCC CCATGGGGAA AACCTGATGT TGGTACTGGA AAGTAACGTT CCAGTCCATG TCTTGATGAA GGATATCGGT GAGGAAATTG CTATTTTAAA TGGGGATATT CGTCTACCAG ATGCCATCAA ATTCCTCCAT GTCACCGTCA AAGACGATAT GAAGATCAAT TATATTTTGC TGGATATTTT CGACTGCTTC TTCCGTTACC TCACGCCGTT ACTGCAAAAA GATTTGAGTC TTAATGAGCA CCAATTCTGG CGGTTGGTGG CTGATTGCAT CCATACCTAT CAAGCCCAAC ACCCTGCCAT GGCTAAAAAA TTCAAGAAGT TCGATCTCTT TAAAGCTGAT TTTGTTCGTA CCTGTCTGAA TCGGCTGCAA ATGGCGAATA ACCAACAAAT GATCGATCTT GATGATCGAG AGAAGAATCT GAAATTTGCC GGCACCTTAG TCAACCCAAT TCATGTTTTC AAAACCACAT ACTGA
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Protein sequence | MVSQRQFNEN NIQHLNGENW SHANAHLVGK ILRELTHEKL IAPVCLVTPE DGYHHYSFTP DQDRIEYLFK AKCYQLDHLD IDPSTLTKTL DGHAQLLDAL QLIIELNNRL GISEEMLPVY LDEISSTLYG YAFKYHHNNL SATQLVHANY QTVETAMSEG HPVFIANNGR IGFDITDYAA YAPESAHPIN LIWIAVHQDK TVFSSFTGLS YPQLMQEELG DYQWEQFTQY LTSRGLTAQD YFFMPLHPWQ WHERIATSFA ADIARNDIIY LGQGQDSYLA QQSIRTFFNL SNPHKNYVKT ALSILNMGFM RGLSPHSMVT TPLVNEWLSD LIKQDTFFQQ KKFTLLCERA AMGYFNPHFE TALIKDNPHK KMLSALWRES PMPKLAGHQR LMTMASLLHS DNAGNSVVSA LVHSSGLSAK AWITHYLDAY LSPLLHAFFT YDLVFMPHGE NLMLVLESNV PVHVLMKDIG EEIAILNGDI RLPDAIKFLH VTVKDDMKIN YILLDIFDCF FRYLTPLLQK DLSLNEHQFW RLVADCIHTY QAQHPAMAKK FKKFDLFKAD FVRTCLNRLQ MANNQQMIDL DDREKNLKFA GTLVNPIHVF KTTY
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