Gene YpsIP31758_2433 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2433 
SymbolhisA 
ID5388273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2742043 
End bp2742780 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content55% 
IMG OID640865424 
Product1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 
Protein accessionYP_001401402 
Protein GI153950871 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase 
TIGRFAM ID[TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTATTC CCGCTTTGGA TTTGATCGAA GGCAAGGTGG TGCGTTTGCA TCAGGGCGAT 
TACGGTCAGC AACGTGATTA CGGCAATCAC CCGCTGCCGC GTTTACAAGA TTATCAGCAG
CAAGGTGCTC AGGTTTTACA CTTGGTGGAC CTGACCGGAG CCAAAGATCC GGCCGCTCGC
CAGATCCCAC TACTGCGCGA GTTACTGGCC GGTGTTGATG TGCCGGTGCA AGTCGGCGGC
GGTATCCGTA ATGAACAAGA TGTCGTGGCT TTACTGGAAG CAGGGGCTGC ACGGGTGGTG
GTGGGTTCAA CCGCCGTTAA GCAACCCGAA ATGGTGCAGC AGTGGTTTGA GCGTTACGGT
GCCGAGGCCA TCGTGCTGGC ATTGGACGTT CGCATTAATG AGGCTGGCTG CAAACACGTC
GCCATCAGTG GCTGGCAGGA AAATTCCGAT GCAACGTTAG AGCAAATCGT CGAGCAATAC
CTGCCTTACG GCCTGAAGCA CGTCCTCTGT ACCGATATTT CGCGTGATGG CACGCTGAGC
GGCTCGAATG TTGAACTGTA TCAGGAAGTG TGCCAGCGCT ATCCACAAGT CGCGTTTCAG
GCATCTGGCG GTATCGGCTG TCTGGATGAT ATCGCCCGCT TACGCGGCAG CGGTGTACAG
GGCGTGATTG TTGGCCGTGC GTTACTGGAC GGCAAGTTTA ACGTGAAGGA GGCTATCGCA
TGCTGGCAAA ACGTATAA
 
Protein sequence
MIIPALDLIE GKVVRLHQGD YGQQRDYGNH PLPRLQDYQQ QGAQVLHLVD LTGAKDPAAR 
QIPLLRELLA GVDVPVQVGG GIRNEQDVVA LLEAGAARVV VGSTAVKQPE MVQQWFERYG
AEAIVLALDV RINEAGCKHV AISGWQENSD ATLEQIVEQY LPYGLKHVLC TDISRDGTLS
GSNVELYQEV CQRYPQVAFQ ASGGIGCLDD IARLRGSGVQ GVIVGRALLD GKFNVKEAIA
CWQNV