| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2420 |
|---|
| Symbol | sbcB |
|---|
| ID | 5384996 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 2725286 |
|---|
| End bp | 2726716 |
|---|
| Gene Length | 1431 bp |
|---|
| Protein Length | 476 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640865411 |
|---|
| Product | exonuclease I |
|---|
| Protein accession | YP_001401389 |
|---|
| Protein GI | 153949389 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2925] Exonuclease I |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGATA AAAATAAGCA ACCAACATTT TACATCCATG ATTATGAAAC CTTCGGCCAG
CGGCCAGCCT TGGATAGACC TGCGCAATTT GCCGGGGTAC GTACCGATCT GGATTTCAAT
CTCGTCGAAG AGCCATTGGT CATTTACTGC AAGCCCGCAG ATGATTATCT GCCACAGCCC
GAAGCGGTGA TGATAACCGG TATTACCCCC CAACATGCTT TAGCCAACGG GGTCAATGAA
GCTGAATTTT CCCGCCAAAT ACACCAGGCC TTTTCGGTAC CCGGCACCTG TATCCTCGGC
TACAACAATA TTCGTTTTGA TGATGAAGTC AGTCGCAACA TTTTCTATCG TAATTTTTAT
GATCCCTATG CCTACAGTTG GCAGGGCGGA AATTCCCGTT GGGACCTGTT GGATGTGATG
CGCGCCTGCT ATGCCCTGCG CCCAGAAGGT ATTGTTTGGC CCGAAAATGA TGATGGCCTG
CCCAGCTTTA AACTGGAACA TTTAACCAAA GCCAATGGCG TCGAACATTT ACAGGCGCAT
GATGCGATGT CCGATGTCTA CGCCACCATT GCAATGGCAA AATTGGTGAA GCAGGCCCAA
CCCCGTCTGT TTGATTATCT GTATCAGCAC CGTAGTAAGC ATAAGATCAA TGCGTTGATT
GATATCGCGG AGATGACACC ACTGGTTCAT GTGTCTGGTA TGTTTGGTGC CGCACGGGGT
AACACCAGTT GGGTGGCACC GCTGGCCTGG CACCCCGAGA ACAAAAATGC GGTGATTATG
TGCGATCTGG CCGGGGATAT GTCCCCACTG CTAGAGTTGG ACAGCGATAC ATTGCGCGAA
CGTCTGTATA CCCGCCGTGA CAAGCTCCAG GCCCAAGAGT CGGCAATCCC TATCAAACTG
GTACATATCA ATAAATGTCC GGTATTGGCT CCTGCAAAAA CTCTGCTGCC AGAGAATGCC
GATCGCTTGG GGATTGATCG CCAGCGTTGT TTGCAAAATC TACAACTGCT GCGGCAAAAC
CCACAGGTGC GTGAAAAAGT GGTCGCGCTG TTTGCACAAG CTGAGCCATT CGCGGTTGCC
GATGATGTGG ATACACAGTT GTATAACGGC TTTTTCAGTG ATGCTGACCG CGCCACCATG
AAGATTATCC AGCAAACTGA GCCACAAAAT CTGCCAGCAC TGGATTTGAC ATTTCAGGAC
CCACGGTTGG AGGCCCTGCT ATTCCGCTTC CGTGCCCGTA ACTACCCAAA TACCTTGAAC
GACAGCGAAC AACAGCGTTG GTTACAGCAT CGCCGTGAAG CGCTTAGCCC TGAGCGGGTA
CAAGATTATG TTTTGCAACT GGAACAATTT TATAACCAGT ATGAAGACGA TAAAGAGAAA
CTTGCGCTGC TAAAAGCGTT GTTTGAATAT GCCAAGGGAT TAGTGAGTTA A
|
|---|
| Protein sequence | MSDKNKQPTF YIHDYETFGQ RPALDRPAQF AGVRTDLDFN LVEEPLVIYC KPADDYLPQP
EAVMITGITP QHALANGVNE AEFSRQIHQA FSVPGTCILG YNNIRFDDEV SRNIFYRNFY
DPYAYSWQGG NSRWDLLDVM RACYALRPEG IVWPENDDGL PSFKLEHLTK ANGVEHLQAH
DAMSDVYATI AMAKLVKQAQ PRLFDYLYQH RSKHKINALI DIAEMTPLVH VSGMFGAARG
NTSWVAPLAW HPENKNAVIM CDLAGDMSPL LELDSDTLRE RLYTRRDKLQ AQESAIPIKL
VHINKCPVLA PAKTLLPENA DRLGIDRQRC LQNLQLLRQN PQVREKVVAL FAQAEPFAVA
DDVDTQLYNG FFSDADRATM KIIQQTEPQN LPALDLTFQD PRLEALLFRF RARNYPNTLN
DSEQQRWLQH RREALSPERV QDYVLQLEQF YNQYEDDKEK LALLKALFEY AKGLVS
|
|---|
| |