| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2416 |
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| Symbol | |
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| ID | 5385940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 2719762 |
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| End bp | 2722989 |
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| Gene Length | 3228 bp |
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| Protein Length | 1075 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640865407 |
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| Product | putative intimin |
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| Protein accession | YP_001401385 |
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| Protein GI | 153950341 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCTCT ATCGCATATC ATCACTACAT CAAGCCAAGC AGTTAAATAA AAACAAGCAG
TTAAATAAAA CCCGAATTTC AAAATCAGTC GTCTGGGCAA ATATTGTAAT CCAAGCCATA
TTTCCTTTGA GTATTGCTTT TACCCCAGCG GTAATGGCGG CTGAAACCGT CGGAGCCTCG
GATGAAAAAC CGCGTTCGGC CTCACAGGCT GAACAGTCTA CCGCCAATGC AGCAACACGG
TTGGCATCAA TATTGACAAA TGATGACTCT GCCAAACAAG CGAGTTCCAT TGCGCGCGGC
ACCGCTGCCA ATGCAGGTAA TGAAGCATTG CAAAAGTGGT TTAATCAGTT TGGCAGTGCG
AAAGTACAAC TAAATCTAGA TGAGAAATTG AGCCTTAAAG GCAGCCAACT GGATGTATTG
CTGCCGCTGA CCGATAGCCC AGATCTACTC ACCTTTACTC AGTTGGGTGG CCGCTATATT
GATGACCGAG TGACATTGAA CGTTGGTTTG GGTCAGCGTC ATTTCTTTGC ACAGCAAATG
CTGGGCTACA ACCTGTTTGT TGATCATGAT GCCAGCTATA GCCATACCCG TATTGGCGTC
GGTGCTGAAT ATGGTCGTGA TTTTATTAAT CTGGCAGCTA ACGGCTACTT TGGTGTCAGT
GGTTGGAAAA ATTCGCCAGA TCTTGATAAG TATGATGAAA AAGTCGCAAA CGGCTTTGAT
TTACGCAGTG AAGCTTATCT GCCAACGTTG CCACAATTGG GGGGGAAACT GATATATGAA
CAATATTTTG GTGATGAAGT TGGCTTGTTT GGTGTGGATA ACCGTCAGAA AAACCCTCTT
GCGGTCACTC TGGGTGTGAA TTATACCCCA ATTCCTTTAT TTACTGTTGG TGTCGACCAT
AAAATGGGGC GCGCAGGAAT GAATGACACC CGGTTCAACC TTGGTTTTAA CTATGCATTT
GGCACTCCTC TGGCACATCA GCTCGATTCG GATGCCGTCG CAATTAAACG TAGCTTAATG
GGTAGCCGCT ATAATCTGGT CGACCGTAAT AATCAGATTG TGATGAAATA CCGTAAGCAG
AATCGGGTTA CCCTAGAGCT GCCAGCACGT GTTAGTGGTG CGGCAAGACA AACAATGCCA
TTAGTGGCAA ATGCCACAGC ACAACAAGGT ATTGATCGTC TTGAATGGGA AGCCAGTGCC
TTAACGCTAG CGGGTGGAAA AATAACCGGT AGCGGCAATA ATTGGCAGAT AACATTGCCA
AGCTATCTGT CTGGTGGTGA GGGTAATAAC ACTTATCGTA TTAGTGCTAT CGCATACGAC
ACCCTTGGTA ATGCTTCTCC CGTTGCTTAC AGCGATCTCG TGGTAGATAG CCATGGTGTG
AATACTAACG CCTCAGGCTT GACTGCTGCG CCAGAAATTC TGCCGGCAAA TGCGAGTGCA
AGCAGTGTTA TTGAATTCAA TATTAAAGAT AATGCTAACC AGCCCATCAC GGGGATTGCC
GATGAACTGG CATTTTCTCT CGAACTGGTA GAGTTACCTG AAGAATTGGC TAAGGCTAAA
GCACGTTCAG TGCCATTGAA GACGGTGTCT CATACTCTAA CGAAGATTAC TGAATCTGCT
CCAGGTATTT ATCAGGCAAC ACTCACATCG GGAAGTAAGC CACAACTGAT TAATATTACC
GCCCAGATTA ATGGTGTGCC ATTAGCCGAT GTGCAAACCA AGGTGACGTT GATTGCCGAT
CAAAGCACGG CAACGTTACA AACGAGCAGC CTGCAAATCA TCACCAATGG TAGCCTGGCA
GATGATACTG ATGCTAACCA AATACGCGCC GTGGTGGTTG ATGCTTATGG CAATAAATTG
TCTGGTGTTC AAGTCAATTT CACTGTGGGC AATAATGCCA AAATAACAGA AACCACCTTG
AGCGACAAAC AAGGGGGAGT AACCGCAGCA ATCACCAGTA CCAAAGCGGG TACATATACG
GTCACAGCCG AACTTAATGG GGTAACACAA CAGATCGATG TTAACTTTAT CCCAGATGCT
GGCACTGCAA CACTGGATGA CAGTGATGAG TATAAATTGC AGTGGGTCAC TAATGGTCAG
GTAGCCGATG GTGAAAGCAC CAATAGCGTT CAACTGACGG TAGTCGATAA GTTTGGTAAC
ACCGTACCTG GTGTGGATGT CGCCTTTACC ACGGATATCG GGGCGATAAT TAGTGAAGTC
ACCCCAACGG ATGCTAATGG TGTCGCAACA GCAAAAATCA TCAGTAGTCA GGCTAAAAGC
CATACAGTGA AAGCAACGCT CAACCGCAAG GAACAAACCG TAGAGGTTAA CTTTATTGCC
GATACTGCCA CGGCAGAAAT TACGGCTAAT AACTTTACGG TAGAAGTCGA TGGTCAAGTC
GCTGGGAGCG GAACTAACCA AGTACAGGCC CTTGTTGTGG ATAAAAAGGG AAATCCTGTT
GCTAATATGA CCGTGAATTT TACCGCCACT AACGGCGTGG TCGTAGAGAC AACCTCAGCC
AAAACAGATG AGAATGGTAA AGTAACGACT AACCTCTCTA TGACCAATGT TGGTGGGACT
ATCAGTACGG TGACGGCAAC GATGATCAAT TCAGCGAACG TGACCAGTAC ACAAGATAAA
CCCGTCATCT TCTATCCAGA TTTCACTAAA GCCACGTTGA ATACGCCAGC GAATACTTAT
AGTGGCTTTA ATATCAACAG TGGTTTCCCA ACAACAGGAT TTAAAAATAC TCACTTCCAA
TTATCGCCAC ATGGTATTAC CGGCGCTAAC AGTGACTATG GTTGGGTAAG TAGTCATCCT
AACGTGAGTG TCAGTAACAC AGGTGCAATT ACGCTTCAGG ATAATCCTGG AGGGAAAGTG
ACCATTACGG CAACCTGGAA ACATGACAGC AGCAAAGTGT TCACTTATGA CTTTACGCTA
AATTATTGGG TAGGCCTCTA TAGCTCGACT AATCTGAGCT GGGCGCAGGC CAATGCGTCA
TGTATCAACG CCGGAATGAG ATTACCGACC AATAGCGAAG TATCGGCGGG TCAAGATGTT
CGTGGTGTAG GTTCGTTATT CGGTGAGTGG GGTAACTTGA ATGCCTATCC AAGTTTCCCA
ACCGCCCAGA TCATTTGGAC GTCAGTAGAT ACTAATGATT TCCATATCGA TACTGGTCTT
ACTCATTCGG CTTCGAATGT CACTCTTGCT TACATGTGTA TAAAATAA
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| Protein sequence | MSLYRISSLH QAKQLNKNKQ LNKTRISKSV VWANIVIQAI FPLSIAFTPA VMAAETVGAS
DEKPRSASQA EQSTANAATR LASILTNDDS AKQASSIARG TAANAGNEAL QKWFNQFGSA
KVQLNLDEKL SLKGSQLDVL LPLTDSPDLL TFTQLGGRYI DDRVTLNVGL GQRHFFAQQM
LGYNLFVDHD ASYSHTRIGV GAEYGRDFIN LAANGYFGVS GWKNSPDLDK YDEKVANGFD
LRSEAYLPTL PQLGGKLIYE QYFGDEVGLF GVDNRQKNPL AVTLGVNYTP IPLFTVGVDH
KMGRAGMNDT RFNLGFNYAF GTPLAHQLDS DAVAIKRSLM GSRYNLVDRN NQIVMKYRKQ
NRVTLELPAR VSGAARQTMP LVANATAQQG IDRLEWEASA LTLAGGKITG SGNNWQITLP
SYLSGGEGNN TYRISAIAYD TLGNASPVAY SDLVVDSHGV NTNASGLTAA PEILPANASA
SSVIEFNIKD NANQPITGIA DELAFSLELV ELPEELAKAK ARSVPLKTVS HTLTKITESA
PGIYQATLTS GSKPQLINIT AQINGVPLAD VQTKVTLIAD QSTATLQTSS LQIITNGSLA
DDTDANQIRA VVVDAYGNKL SGVQVNFTVG NNAKITETTL SDKQGGVTAA ITSTKAGTYT
VTAELNGVTQ QIDVNFIPDA GTATLDDSDE YKLQWVTNGQ VADGESTNSV QLTVVDKFGN
TVPGVDVAFT TDIGAIISEV TPTDANGVAT AKIISSQAKS HTVKATLNRK EQTVEVNFIA
DTATAEITAN NFTVEVDGQV AGSGTNQVQA LVVDKKGNPV ANMTVNFTAT NGVVVETTSA
KTDENGKVTT NLSMTNVGGT ISTVTATMIN SANVTSTQDK PVIFYPDFTK ATLNTPANTY
SGFNINSGFP TTGFKNTHFQ LSPHGITGAN SDYGWVSSHP NVSVSNTGAI TLQDNPGGKV
TITATWKHDS SKVFTYDFTL NYWVGLYSST NLSWAQANAS CINAGMRLPT NSEVSAGQDV
RGVGSLFGEW GNLNAYPSFP TAQIIWTSVD TNDFHIDTGL THSASNVTLA YMCIK
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