| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2407 |
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| Symbol | |
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| ID | 5387140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 2708882 |
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| End bp | 2710312 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640865398 |
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| Product | hypothetical protein |
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| Protein accession | YP_001401376 |
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| Protein GI | 153946973 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.149109 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAATGA ACAGGGTTTC AGAGGCCGTT AAGTTGAAAA TCTTCCGCGA AAGCGTGTGG
TATAAGAAGC GAAAATCATC TCGGGTACTC TTTTGGCGTG AGATCACACC GCTGGCCTTT
CCGTTGTTTA TTGAAGGTTT GTGCGTACTG CTGATGGGGG TATTTAGTAC TCTGCTGGTG
AGTTGGTTGG GTAAAGAAGC GATGGCAGCG GTGGGGCTAG CCGACAGTTT CAATATGCTG
ATTGCGGCTT TTTTTGCCTC CGTGGCATTA GGGACCTCGG TCGTTGTGGC CTTCAGTCTG
GGCCAACGCA AACGCCAGCA GGCGCAAACT GCCGCCCGAC AATCCATGAC ATTGCTGGTA
TTAATCTCCC TGTTATTAGT TGTCTTGGTT CATTTTTCAG GCCAGACCAT TATTGATTTA
ATGGCTAACC AGGCAGACCC CTCGGTTAAA GCAATGGCCC TGACCTATCT GCATTTCACT
GTCTGGAATT ACCCTGCGAT GGCGATAACC TTGGTGGGGT GCGGTGCGTT ACGTGGTGCG
GGCAATACGC GTTTGCCGAT GCTTATTAAC ATTGGCATGA ACATTCTTAA CATTGTCATT
AGCAGTATAT TAATTTATGG CCTCTTTAAT TGGCAGGGAC TGGGTTTTAT CGGTGCCGGT
ATTGGCATCA CATTGGCCCG CTCTGCAGGC GCACTGGTGG TGGTCGTGCT GCTGATTTAC
GGCGCGAATA ATACGTTGCG GATCCCCTTC AAAGCCTATT TCATGCCTTT TACCTCGGCC
ATTATGTTTG AGGTGCTGAG CATTGGTATT CCGGCGAGTG TTGAGTCAGT TATGTTCAAT
ATTGGCAAGT TAATCACTCA ACGGTTTGTT GCCGGCATGG GGACCGACGT GATCGCGGGT
AACTTTATTG CCTTTTCAAT TGTGGCGATA ATCAATCTGC CCGGTAATGC GCTGGGGTAC
ACCTCAACCA TTATTATTGG TACCCGGCTG GGCAAGGGGC AAATTTTGCA ACCTATTCGG
CAGATAAAAC ATATCTTTTG GCTATCGACG CTTGGGGTCT GCTTTATTGC ATTGCTGTCC
ATTCCCAGTG CGGGTTTTCT GGCCTCGCTG TATACCGATG ATCCGGCAGT TATCACGGTG
GTGAAGCATT TGATCTGGAT GAATGCGTTA TTTATGCCGA TTTGGGCGGC GTCTTGGGTC
TTACCTGCCG GCTTGAAAGG CGCTAAGGAT GCCAGTTACA CCATGTGGGT TGCCCTGGCC
GGGATGTGGG GCTGTCGCAT TATTGCTGGC TACATTCTGG GGGTAACGCT AGGGTTTGGC
GTGACGGGGG TATGGATGGG GATGTTCCTG GATTGGATGG TCCGGGGGGG GTTGTTTTAT
CGCCGCATGT CCACGGGCCG TTGGTTATGG CGCTACCGGC CCAGCGTCTG A
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| Protein sequence | MQMNRVSEAV KLKIFRESVW YKKRKSSRVL FWREITPLAF PLFIEGLCVL LMGVFSTLLV
SWLGKEAMAA VGLADSFNML IAAFFASVAL GTSVVVAFSL GQRKRQQAQT AARQSMTLLV
LISLLLVVLV HFSGQTIIDL MANQADPSVK AMALTYLHFT VWNYPAMAIT LVGCGALRGA
GNTRLPMLIN IGMNILNIVI SSILIYGLFN WQGLGFIGAG IGITLARSAG ALVVVVLLIY
GANNTLRIPF KAYFMPFTSA IMFEVLSIGI PASVESVMFN IGKLITQRFV AGMGTDVIAG
NFIAFSIVAI INLPGNALGY TSTIIIGTRL GKGQILQPIR QIKHIFWLST LGVCFIALLS
IPSAGFLASL YTDDPAVITV VKHLIWMNAL FMPIWAASWV LPAGLKGAKD ASYTMWVALA
GMWGCRIIAG YILGVTLGFG VTGVWMGMFL DWMVRGGLFY RRMSTGRWLW RYRPSV
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