Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2407 |
Symbol | |
ID | 5387140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 2708882 |
End bp | 2710312 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640865398 |
Product | hypothetical protein |
Protein accession | YP_001401376 |
Protein GI | 153946973 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.149109 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAATGA ACAGGGTTTC AGAGGCCGTT AAGTTGAAAA TCTTCCGCGA AAGCGTGTGG TATAAGAAGC GAAAATCATC TCGGGTACTC TTTTGGCGTG AGATCACACC GCTGGCCTTT CCGTTGTTTA TTGAAGGTTT GTGCGTACTG CTGATGGGGG TATTTAGTAC TCTGCTGGTG AGTTGGTTGG GTAAAGAAGC GATGGCAGCG GTGGGGCTAG CCGACAGTTT CAATATGCTG ATTGCGGCTT TTTTTGCCTC CGTGGCATTA GGGACCTCGG TCGTTGTGGC CTTCAGTCTG GGCCAACGCA AACGCCAGCA GGCGCAAACT GCCGCCCGAC AATCCATGAC ATTGCTGGTA TTAATCTCCC TGTTATTAGT TGTCTTGGTT CATTTTTCAG GCCAGACCAT TATTGATTTA ATGGCTAACC AGGCAGACCC CTCGGTTAAA GCAATGGCCC TGACCTATCT GCATTTCACT GTCTGGAATT ACCCTGCGAT GGCGATAACC TTGGTGGGGT GCGGTGCGTT ACGTGGTGCG GGCAATACGC GTTTGCCGAT GCTTATTAAC ATTGGCATGA ACATTCTTAA CATTGTCATT AGCAGTATAT TAATTTATGG CCTCTTTAAT TGGCAGGGAC TGGGTTTTAT CGGTGCCGGT ATTGGCATCA CATTGGCCCG CTCTGCAGGC GCACTGGTGG TGGTCGTGCT GCTGATTTAC GGCGCGAATA ATACGTTGCG GATCCCCTTC AAAGCCTATT TCATGCCTTT TACCTCGGCC ATTATGTTTG AGGTGCTGAG CATTGGTATT CCGGCGAGTG TTGAGTCAGT TATGTTCAAT ATTGGCAAGT TAATCACTCA ACGGTTTGTT GCCGGCATGG GGACCGACGT GATCGCGGGT AACTTTATTG CCTTTTCAAT TGTGGCGATA ATCAATCTGC CCGGTAATGC GCTGGGGTAC ACCTCAACCA TTATTATTGG TACCCGGCTG GGCAAGGGGC AAATTTTGCA ACCTATTCGG CAGATAAAAC ATATCTTTTG GCTATCGACG CTTGGGGTCT GCTTTATTGC ATTGCTGTCC ATTCCCAGTG CGGGTTTTCT GGCCTCGCTG TATACCGATG ATCCGGCAGT TATCACGGTG GTGAAGCATT TGATCTGGAT GAATGCGTTA TTTATGCCGA TTTGGGCGGC GTCTTGGGTC TTACCTGCCG GCTTGAAAGG CGCTAAGGAT GCCAGTTACA CCATGTGGGT TGCCCTGGCC GGGATGTGGG GCTGTCGCAT TATTGCTGGC TACATTCTGG GGGTAACGCT AGGGTTTGGC GTGACGGGGG TATGGATGGG GATGTTCCTG GATTGGATGG TCCGGGGGGG GTTGTTTTAT CGCCGCATGT CCACGGGCCG TTGGTTATGG CGCTACCGGC CCAGCGTCTG A
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Protein sequence | MQMNRVSEAV KLKIFRESVW YKKRKSSRVL FWREITPLAF PLFIEGLCVL LMGVFSTLLV SWLGKEAMAA VGLADSFNML IAAFFASVAL GTSVVVAFSL GQRKRQQAQT AARQSMTLLV LISLLLVVLV HFSGQTIIDL MANQADPSVK AMALTYLHFT VWNYPAMAIT LVGCGALRGA GNTRLPMLIN IGMNILNIVI SSILIYGLFN WQGLGFIGAG IGITLARSAG ALVVVVLLIY GANNTLRIPF KAYFMPFTSA IMFEVLSIGI PASVESVMFN IGKLITQRFV AGMGTDVIAG NFIAFSIVAI INLPGNALGY TSTIIIGTRL GKGQILQPIR QIKHIFWLST LGVCFIALLS IPSAGFLASL YTDDPAVITV VKHLIWMNAL FMPIWAASWV LPAGLKGAKD ASYTMWVALA GMWGCRIIAG YILGVTLGFG VTGVWMGMFL DWMVRGGLFY RRMSTGRWLW RYRPSV
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