| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2405 |
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| Symbol | |
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| ID | 5387763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 2706597 |
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| End bp | 2707478 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640865396 |
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| Product | polysaccharide deacetylase family protein |
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| Protein accession | YP_001401374 |
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| Protein GI | 153948361 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.000804057 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAAAG AAATATTCTG TGCGTTTGGC GTTGATGTTG ACGCGGTGGC CGGTTGGTTA
GGATCTTATG GCGGTGAGGA CTCACCCGAT GATATTTCAC GCGGTATGTT CTCCGGTGAA
GTGGGTACGC CACGGTTGCT CAAACTCTTT GCTGACCATA ACCTGCGGGC CACCTGGTTT
ATTCCGGGTC ACTCAATCGA AACATTCCCT GAACAAATGA AAGCGGTAGC CGCGGCTGGA
CACGAAGTGG GGATCCATGG TTACAGCCAT GAAAACCCTA TCGCCATGAC ACCAGCGCAA
GAAGAGGCCG TACTGGATCA CTGTATCGCC CTCCTCACTC AATTGACCGG AAAACCGCCC
ACGGGCTATG TCGCACCTTG GTGGGAATTT AGCAACGTCA CCAACGAGCT GTTGCTGAAA
AAAGGCATTA AATATGACCA CAGCCTGATG CACCACGATT TTCACCCCTA CTATGTGCGC
GTCGGCGACC ATTGGACCCG CATCGATTAC AGCAAGTCCC CAGACCACTG GATGAAACCA
TTGCAACGAG GGGCCGAAAC CGCACTGGTG GAGATCCCGG CTAACTGGTA CCTGGATGAT
TTACCCCCCA TGATGTTTAT CAAGAAAGCG CCCAATAGCC ATGGTTTTGT TAATCCCCGC
CATCTGGAAG AGATGTGGCG CGATCAGTTC GACTGGGTAT ACCGAGAACA TGATTATGCC
GTATTTACCA TGACCATCCA TCCTGACGTA TCCGGTCGCC CGCAAGTGTT ATTAATGCTG
GAACGGTTGC TCAAACATAT CCAGAGCCAT CAGGGTGTAC GTTTCGTGAC CTTTGATGAG
ATTGCTGACG ACTACTTGCG CCGTATGCCG CGCAAAATTT GA
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| Protein sequence | MAKEIFCAFG VDVDAVAGWL GSYGGEDSPD DISRGMFSGE VGTPRLLKLF ADHNLRATWF
IPGHSIETFP EQMKAVAAAG HEVGIHGYSH ENPIAMTPAQ EEAVLDHCIA LLTQLTGKPP
TGYVAPWWEF SNVTNELLLK KGIKYDHSLM HHDFHPYYVR VGDHWTRIDY SKSPDHWMKP
LQRGAETALV EIPANWYLDD LPPMMFIKKA PNSHGFVNPR HLEEMWRDQF DWVYREHDYA
VFTMTIHPDV SGRPQVLLML ERLLKHIQSH QGVRFVTFDE IADDYLRRMP RKI
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