Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2400 |
Symbol | |
ID | 5386111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 2701107 |
End bp | 2701613 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640865390 |
Product | TRAP transporter, DctQ-like membrane protein |
Protein accession | YP_001401369 |
Protein GI | 153949652 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.000000887899 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCGTT ATTATCTCTC TGCGATGGAT GTTTTATACC GCCTATCAAT CTGGGTAGCC GGTATCGCTT TAATTATTAT GGTTGCCGCT ATCCCTATCG GTATATTTGC CCGTTATATT CAAAACGACG GCTTATCTTG GCCAGAACCC GTTGCTATTT TATGTATGGT GACGTTCACC TTTATTGGCG CAGCGGCCAG TTATCGCTCT GGTTCTCATA TTGCCGTGAG CATGGTAACC GATAGAATTC CCGAGGCGGG TAAGAAGATC TGTGCGTTGC TGGTTAATTT GCTGATGGTG ATGATAAGTC TATTTATTCT GAGCTACAGC TATATTCTGT GCAGCGAATT ATGGTCGCAA CCCGTCGCCG AGTTCCCATT ATTGACCGCC GGACAAACCT ATCTTCCTTT ACCTGTCGGT TCTGCTATTA CCCTGATGTT TATTATCGAG CGCCTATTTT TTGGCCCGCA AACCCAGCGC CCGGTAGTGA TGATCGGCAA TTCATAA
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Protein sequence | MARYYLSAMD VLYRLSIWVA GIALIIMVAA IPIGIFARYI QNDGLSWPEP VAILCMVTFT FIGAAASYRS GSHIAVSMVT DRIPEAGKKI CALLVNLLMV MISLFILSYS YILCSELWSQ PVAEFPLLTA GQTYLPLPVG SAITLMFIIE RLFFGPQTQR PVVMIGNS
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