Gene YpsIP31758_2389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2389 
Symbol 
ID5385052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2688667 
End bp2690385 
Gene Length1719 bp 
Protein Length572 aa 
Translation table11 
GC content47% 
IMG OID640865378 
ProductABC transporter, permease protein/ATP-binding protein 
Protein accessionYP_001401358 
Protein GI153950266 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.000145644 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCCGCC GTTTTTTCTC TTATTACGCC CCGTATAAAG GGCTTTTCTT CCTAGATTTT 
GGTTGCGCAA TTCTAGCCGG GCTCTTAGAA CTCAGCTTCC CAATGGCGGT AAAGCTGTTT
ATCGATAAAC TGCTTCCCAA TCAGGACTGG GTGATGATCG TATGGGCAGC GGCTGGGCTA
CTACTGATTT ATCTACTGAA TACAGTACTG ATGGCCATTG TCAATTATTG GGGTCATGCG
CTCGGTGTCG GTATCGAAAC AGACATGCGC CGTCAAGCAT TCAATCACTT ACAAAAACTG
TCATTTAGCT ATTATGACAA TATAAAAACA GGTCATATCA TCACGCATGT CACCAAAGAT
CTGGAAGAAG TCGGCGAGGT TGCCCACCAC GGTCCAGAAG ACCTCTTCAT TGCCGTCATG
ACCTTTATTG GTGCCTTTAT CTTGATGGCC ACCGTTCATT TACCACTGGC GATGGTCACT
ATCATCATTG TGCCGTTTAT GACCTATCTG GTTACCCGCT ATGGTTCAAA AATGACGGAT
ACCTGGCGCA AACTGTTTGG CCAGGTGGGT AATTTTAATA CCCGTATCGA AGAGAGCATT
GGTGGTATTC GCGTGGTAAA AGCCTTTGCG AATGAACCCC ACGAAGAGAA ACTCTTTGCC
AAAGATAACG AAAACTACCG GACGACCAAG CTACGAGCCT ATCGGATAAT GACCACCAGC
ATGACCATGA GCTATCTCAG CACCCGTTTG GTGCAATTGA TCGTGATGGT CGTTGGCACC
TGGTATGTAA TTCACGACCA ACTGAGCTAC GGCGGCTTTG TCGGTTTTCT GCTCTTAGTC
GAAGTATTCT TCCGCCCTGT AGAGAAAATA ACTTCAGTAC TGGAAAGTTA CCCTAAAGGA
ATTGCTGGCT TTAAGCGATT CACCCAGTTG ATTGATACAT TACCTGACAT TGTCGATCAA
CCGAATGCGC GTCCGGTTGG TCACCTCCGT GGGGATATCA GCTACCAACA TGTTTGCTTT
GGTTATTCGT CCCAAGCGCC CATTTTCACT GATTTAAATC TGCAAATTCA GGCGGGTGAA
ACCGTCGCGT TCGTCGGGCC ATCTGGGGCG GGTAAAACCA CGTTGTGCTC ATTGCTCCCT
CGTTTCTATG AGCTGAATGC AGGTGCTATC ACTATTGATG GGATTGATAT CCGAGAGATG
ACACAGCAGT CTTTACGCAA CAATATTGGT ATTGTTCAGC AGGATGTCTT CTTATTCGGC
GGATCTATCC GAGAGAATAT TGCCTACGGT AAGCTGAATG CCAGCGATGA CGAAATTATG
GTTGCCGCAC AACGGGCACG TTTGGATGAA TTAATCAGTT CTCTGCCCGA AGGGCTAGAT
ACTCTCGTCG GTGAACGTGG GGTGAAATTA TCTGGCGGAC AAAAACAGCG TCTATCCATT
GCGCGTATTT TTCTGAAGAA CCCCCCGATT CTGATTTTGG ATGAGGCTAC ATCAGCGCTG
GACACCGCTA CCGAGCAAGC GATTCAATTG GCGCTAACAG AATTATCTCA AGGCAGAACC
ACACTGGTCA TTGCACACCG CTTAGCCACA ATTCAAAATG CTGATCGTAT TATTGTGGTC
GATAAAGGAG GGATTATTGA ACAAGGGGAT CATCACGAGT TACTGGCACG TCAAGGTGCC
TACGCAATAT TACACCATGC TCAGTTTAGT GCGGCCTGA
 
Protein sequence
MLRRFFSYYA PYKGLFFLDF GCAILAGLLE LSFPMAVKLF IDKLLPNQDW VMIVWAAAGL 
LLIYLLNTVL MAIVNYWGHA LGVGIETDMR RQAFNHLQKL SFSYYDNIKT GHIITHVTKD
LEEVGEVAHH GPEDLFIAVM TFIGAFILMA TVHLPLAMVT IIIVPFMTYL VTRYGSKMTD
TWRKLFGQVG NFNTRIEESI GGIRVVKAFA NEPHEEKLFA KDNENYRTTK LRAYRIMTTS
MTMSYLSTRL VQLIVMVVGT WYVIHDQLSY GGFVGFLLLV EVFFRPVEKI TSVLESYPKG
IAGFKRFTQL IDTLPDIVDQ PNARPVGHLR GDISYQHVCF GYSSQAPIFT DLNLQIQAGE
TVAFVGPSGA GKTTLCSLLP RFYELNAGAI TIDGIDIREM TQQSLRNNIG IVQQDVFLFG
GSIRENIAYG KLNASDDEIM VAAQRARLDE LISSLPEGLD TLVGERGVKL SGGQKQRLSI
ARIFLKNPPI LILDEATSAL DTATEQAIQL ALTELSQGRT TLVIAHRLAT IQNADRIIVV
DKGGIIEQGD HHELLARQGA YAILHHAQFS AA