Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2389 |
Symbol | |
ID | 5385052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 2688667 |
End bp | 2690385 |
Gene Length | 1719 bp |
Protein Length | 572 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640865378 |
Product | ABC transporter, permease protein/ATP-binding protein |
Protein accession | YP_001401358 |
Protein GI | 153950266 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.000145644 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCCGCC GTTTTTTCTC TTATTACGCC CCGTATAAAG GGCTTTTCTT CCTAGATTTT GGTTGCGCAA TTCTAGCCGG GCTCTTAGAA CTCAGCTTCC CAATGGCGGT AAAGCTGTTT ATCGATAAAC TGCTTCCCAA TCAGGACTGG GTGATGATCG TATGGGCAGC GGCTGGGCTA CTACTGATTT ATCTACTGAA TACAGTACTG ATGGCCATTG TCAATTATTG GGGTCATGCG CTCGGTGTCG GTATCGAAAC AGACATGCGC CGTCAAGCAT TCAATCACTT ACAAAAACTG TCATTTAGCT ATTATGACAA TATAAAAACA GGTCATATCA TCACGCATGT CACCAAAGAT CTGGAAGAAG TCGGCGAGGT TGCCCACCAC GGTCCAGAAG ACCTCTTCAT TGCCGTCATG ACCTTTATTG GTGCCTTTAT CTTGATGGCC ACCGTTCATT TACCACTGGC GATGGTCACT ATCATCATTG TGCCGTTTAT GACCTATCTG GTTACCCGCT ATGGTTCAAA AATGACGGAT ACCTGGCGCA AACTGTTTGG CCAGGTGGGT AATTTTAATA CCCGTATCGA AGAGAGCATT GGTGGTATTC GCGTGGTAAA AGCCTTTGCG AATGAACCCC ACGAAGAGAA ACTCTTTGCC AAAGATAACG AAAACTACCG GACGACCAAG CTACGAGCCT ATCGGATAAT GACCACCAGC ATGACCATGA GCTATCTCAG CACCCGTTTG GTGCAATTGA TCGTGATGGT CGTTGGCACC TGGTATGTAA TTCACGACCA ACTGAGCTAC GGCGGCTTTG TCGGTTTTCT GCTCTTAGTC GAAGTATTCT TCCGCCCTGT AGAGAAAATA ACTTCAGTAC TGGAAAGTTA CCCTAAAGGA ATTGCTGGCT TTAAGCGATT CACCCAGTTG ATTGATACAT TACCTGACAT TGTCGATCAA CCGAATGCGC GTCCGGTTGG TCACCTCCGT GGGGATATCA GCTACCAACA TGTTTGCTTT GGTTATTCGT CCCAAGCGCC CATTTTCACT GATTTAAATC TGCAAATTCA GGCGGGTGAA ACCGTCGCGT TCGTCGGGCC ATCTGGGGCG GGTAAAACCA CGTTGTGCTC ATTGCTCCCT CGTTTCTATG AGCTGAATGC AGGTGCTATC ACTATTGATG GGATTGATAT CCGAGAGATG ACACAGCAGT CTTTACGCAA CAATATTGGT ATTGTTCAGC AGGATGTCTT CTTATTCGGC GGATCTATCC GAGAGAATAT TGCCTACGGT AAGCTGAATG CCAGCGATGA CGAAATTATG GTTGCCGCAC AACGGGCACG TTTGGATGAA TTAATCAGTT CTCTGCCCGA AGGGCTAGAT ACTCTCGTCG GTGAACGTGG GGTGAAATTA TCTGGCGGAC AAAAACAGCG TCTATCCATT GCGCGTATTT TTCTGAAGAA CCCCCCGATT CTGATTTTGG ATGAGGCTAC ATCAGCGCTG GACACCGCTA CCGAGCAAGC GATTCAATTG GCGCTAACAG AATTATCTCA AGGCAGAACC ACACTGGTCA TTGCACACCG CTTAGCCACA ATTCAAAATG CTGATCGTAT TATTGTGGTC GATAAAGGAG GGATTATTGA ACAAGGGGAT CATCACGAGT TACTGGCACG TCAAGGTGCC TACGCAATAT TACACCATGC TCAGTTTAGT GCGGCCTGA
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Protein sequence | MLRRFFSYYA PYKGLFFLDF GCAILAGLLE LSFPMAVKLF IDKLLPNQDW VMIVWAAAGL LLIYLLNTVL MAIVNYWGHA LGVGIETDMR RQAFNHLQKL SFSYYDNIKT GHIITHVTKD LEEVGEVAHH GPEDLFIAVM TFIGAFILMA TVHLPLAMVT IIIVPFMTYL VTRYGSKMTD TWRKLFGQVG NFNTRIEESI GGIRVVKAFA NEPHEEKLFA KDNENYRTTK LRAYRIMTTS MTMSYLSTRL VQLIVMVVGT WYVIHDQLSY GGFVGFLLLV EVFFRPVEKI TSVLESYPKG IAGFKRFTQL IDTLPDIVDQ PNARPVGHLR GDISYQHVCF GYSSQAPIFT DLNLQIQAGE TVAFVGPSGA GKTTLCSLLP RFYELNAGAI TIDGIDIREM TQQSLRNNIG IVQQDVFLFG GSIRENIAYG KLNASDDEIM VAAQRARLDE LISSLPEGLD TLVGERGVKL SGGQKQRLSI ARIFLKNPPI LILDEATSAL DTATEQAIQL ALTELSQGRT TLVIAHRLAT IQNADRIIVV DKGGIIEQGD HHELLARQGA YAILHHAQFS AA
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