| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2363 |
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| Symbol | hpaE |
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| ID | 5385655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 2662424 |
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| End bp | 2663890 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640865352 |
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| Product | 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase |
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| Protein accession | YP_001401332 |
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| Protein GI | 153950198 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR02299] 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 0.702786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATCG TTAACCATTG GATTGATGGG AAAAATATTA CCAGTAAGGA CTATTTCACA
ACAATCAACC CGGCCACTGG CGAGGTGCTG GCTGACGTGG CAAGCGGGGG GATAAAAGAG
ATCAACCAAG CCGTTGCTGC CGCGAAAAGT GCTTTCCCTC ACTGGGCTAA CCTGCCGATG
AAAGTGCGTG CCCGTCTAAT GCGCCGTCTG GGGGAGTTGA TTGAGCAACA GATCCCAGAA
ATAGCGCAGA TGGAAACGCA GGATACCGGC CTGCCCATTT ATCAAACGCA AAATGCCTTG
ATCCCGCGGG CAGCACATAA CTTCGAATTT TTTGCCGAAA TTTGTCAGCA AATGAATGGC
CAGACGTATC CGGTTGACGA TCAAATGTTG AATTACACCT TGGTGCAACC CGTGGGAGTG
TGTGCGTTGG TCTCCCCTTG GAATGTCCCT TTTATGACGG CGACCTGGAA GGTCGCGCCT
TGTTTGGCGC TGGGTAACAC CGCGATATTG AAAATGTCGG AGCTATCGCC ACTGACCGCA
GACAAACTGG GTGAACTGGC CTTAGAGGCG GGTATACCGG CGGGGGTTCT CAACGTGGTA
CAAGGATATG GGGCCACTGT CGGTGATGCA TTGGTATGTC ATCAGGATGT CCGAGCTATC
TCTTTTACCG GCGGCACCGC GACGGGAAAC CGCATCATGC AACGTGCCGG GTTGAAAAAA
TACTCCATGG AACTCGGTGG TAAATCTCCG GTACTTATCT TCGACGATGC TGATATCGAA
CGGGCTATGG ATGCGGCGCT ATTTTCCATC TTCTCTCTCA ATGGTGAACG TTGCACGGCG
GGTTCGCGCA TTTTTATTCA AGAGAGTCTC TATTCGGCAT TTATTCAACG TTTTGCTGAG
CGGGCCAGCC GTTTACGTGT GGGGGACCCA CAAGATCTCG ACACTCAAGT TGGCGCATTG
ATCAATAAAC CGCATTGGGA CAAAGTTTCC GGCTATATCC AGTTGGGGAT AGAGGAGGGG
GCCACGTTGT TGGCAGGGGG GCCGGATAAA CCCATCGACC TACCTGCTCA TCTGCGCGGA
GGGCACTTCC TGCGTCCAAC GGTGTTGGCC GATGTTGATA ACCGAATGCG GGTTGCTCAG
GAAGAGATTT TTGGACCGGT CGCTTGCCTG ATCCCCTTTA AGAATGAAGA CGCCGGACTG
CGTTTGGCAA ACAGCGTGCC ATACGGTCTG GCTGCTTATA TCTGGACACA AGACGTCAGC
AAAGTGCTGC GTTTGGCCCG AAGTATTGAA GCCGGCATGG TGTTCGTGAA TACCCAGAAT
GTGCGGGATC TCCGCCAGCC ATTTGGCGGC ATCAAGGCAT CGGGAACCGG GCGCGAAGGG
GGAAAGTACA GTTTTGATGT TTTTGCTGAA GTGAAAAACG TCTGTATTTC CATGGGGGAG
CATCCGATCC CCCGTTGGGG GATGTAA
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| Protein sequence | MKIVNHWIDG KNITSKDYFT TINPATGEVL ADVASGGIKE INQAVAAAKS AFPHWANLPM
KVRARLMRRL GELIEQQIPE IAQMETQDTG LPIYQTQNAL IPRAAHNFEF FAEICQQMNG
QTYPVDDQML NYTLVQPVGV CALVSPWNVP FMTATWKVAP CLALGNTAIL KMSELSPLTA
DKLGELALEA GIPAGVLNVV QGYGATVGDA LVCHQDVRAI SFTGGTATGN RIMQRAGLKK
YSMELGGKSP VLIFDDADIE RAMDAALFSI FSLNGERCTA GSRIFIQESL YSAFIQRFAE
RASRLRVGDP QDLDTQVGAL INKPHWDKVS GYIQLGIEEG ATLLAGGPDK PIDLPAHLRG
GHFLRPTVLA DVDNRMRVAQ EEIFGPVACL IPFKNEDAGL RLANSVPYGL AAYIWTQDVS
KVLRLARSIE AGMVFVNTQN VRDLRQPFGG IKASGTGREG GKYSFDVFAE VKNVCISMGE
HPIPRWGM
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