Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2350 |
Symbol | dbpA |
ID | 5388213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 2648098 |
End bp | 2649480 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640865339 |
Product | ATP-dependent RNA helicase DbpA |
Protein accession | YP_001401319 |
Protein GI | 153947047 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCACAA CTTCCTTTTC TTCCCTGACA CTGCCTGCTG AGCAGTTGTC CAATCTTAAT GAACTTGGCT ATACCGAGAT GACCCCGGTA CAAGCTGCGG TGTTACCCGC AATCCTCAAC GGGCAGGATG TCCGGGCGAA GGCCAAAACC GGCAGCGGTA AAACAGCCGC ATTTGGCATT GGTTTGCTGG ACAAAATAGC GGTAGGGGAA TTTGTTACCC AAGCGCTGGT ATTGTGCCCA ACCCGAGAAT TAGCAGACCA GGTCAGTAAA GAGCTGCGCC GTTTAGCACG GTTTACACAA AATATTAAAA TTCTGACCCT GTGTGGCGGC CAACCGATGG GCCACCAATT AGATTCTCTG GTCCATGCAC CGCACATTGT CGTGGGTACG CCAGGGCGTA TTCAGGAACA TCTGCGCAAG AAAACGCTGG TACTTGATGA GTTGAAAACG CTGGTGTTGG ATGAAGCTGA TCGCATGTTG GATATGGGTT TTTCCGATGC CATTGATGAC GTGATTGCGT ATACCCCTCC ACAGCGGCAA ACCTTGTTGT TCTCTGCCAC CTACCCATCA GGTATTGAGC AGATCAGTGC ACGAGTTCAG CGCCAACCAT TGAATGTTGA AGTGGGTGAT ACCGATGAAG AGCCCGCTAT TGAACAGGTG TTTTTTGAAA CGACTCGTGA GAAACGGCTG CCACTGCTGA TCTCAGTTCT GAGCCATTAC CAGCCGGCCT CTTGTGTGGT GTTCTGTAAC ACCAAAAAAG ATTGTCAGAG CGTTTATGAG TCACTGGAAT CACGTGGTAT CAGTGTCTTG GCTTTGCACG GGGATTTAGA ACAGCGTGAT CGTGATCAGG TTCTGGTGCG TTTTGCCAAT CGTAGCTGCC GTGTGTTGGT GGCGACCGAT GTTGCTGCTC GTGGTTTAGA TATCAAGGAT CTGGAGCTGG TCATTAACTT TGAATTGGCG TTTGATCCCG AAATTCACGT ACACCGCATT GGCCGTACCG GGCGCGCAGG GATGAGCGGC CTGGCCGTTA GCCTATGTAC GCCACAGGAA ATGGTACGTG CCCATACCAT CGAAGATTAT CTGCAAATAA AATTGAAATG GACACCTGCG GAACAGGTTA GCCGTAGCAC CAACATCATG CTGGAACCAG AAATGGTGAC GTTATGCATT GACGGGGGGC GCAAAGCTAA AATTCGCCCT GGTGACATTC TCGGGGCATT AACCGGTGAT GCAGGGTTAA CCGCCGCAGA TGTGGGTAAG ATTGATATGT TCCCGGTTCA TGCCTATGTG GCTATCCGTA AAGCCAGTGC CAAGCGTGCG TTGCAACAAT TGCAGCAAGG CAAAATCAAA GGTAAAAACT GTAAAGCCCG TCTATTAAAA TAA
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Protein sequence | MSTTSFSSLT LPAEQLSNLN ELGYTEMTPV QAAVLPAILN GQDVRAKAKT GSGKTAAFGI GLLDKIAVGE FVTQALVLCP TRELADQVSK ELRRLARFTQ NIKILTLCGG QPMGHQLDSL VHAPHIVVGT PGRIQEHLRK KTLVLDELKT LVLDEADRML DMGFSDAIDD VIAYTPPQRQ TLLFSATYPS GIEQISARVQ RQPLNVEVGD TDEEPAIEQV FFETTREKRL PLLISVLSHY QPASCVVFCN TKKDCQSVYE SLESRGISVL ALHGDLEQRD RDQVLVRFAN RSCRVLVATD VAARGLDIKD LELVINFELA FDPEIHVHRI GRTGRAGMSG LAVSLCTPQE MVRAHTIEDY LQIKLKWTPA EQVSRSTNIM LEPEMVTLCI DGGRKAKIRP GDILGALTGD AGLTAADVGK IDMFPVHAYV AIRKASAKRA LQQLQQGKIK GKNCKARLLK
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