| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2346 |
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| Symbol | ptrB |
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| ID | 5388337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 2644458 |
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| End bp | 2646509 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640865335 |
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| Product | protease II |
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| Protein accession | YP_001401315 |
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| Protein GI | 153948082 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1770] Protease II |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.172701 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGACTC CCCCAAAAGC AGATAAACGC CCTTATCCGA TGACGCGACA CGGTGATACG
CGTGTGGATG ACTATTACTG GCTACGTGAT GATGAACGTA CAGATGCTGA TGTACTGAAT
TATTTGCAAG CTGAAAATGC TTTCACGGCG GCGGTGCTTA AGCCACAACA ACAGTTGCGT
GAAACCTTGT ATCAGGAAAT GGTTGGCCGT ATTCCTCCAC AAGAGGAGTC AGTGCCGTAT
GTTCGCAACG GCTACCGTTA TCAAACCCGT TTTGAGCCGG GTAACGAGTA CGCTATCTAT
GTTCGGCAAC CCGTCAGTAC AGACAGCGAC TGGGAAACGC TATTGGATGG TAATCAGCGT
GCCGAGGGCC ATGAGTTTTA TACCTTAGGC GGTTTAGATG TCAGTCCTGA TAACCAGTTA
CTGGCGGTGG CAGAAGATTA TCTATCACGT CGCCAATATG ACATCAGGAT AAAAAACCTA
TCCAGTGGGG GCTGGCACGA TGAAGTTATC AGTAATACGT CAGGCGGATT TGAGTGGGCA
AATGATTCAA AAACGCTGTA TTACGTACGA AAACATGAAA AAACGTTATT GCCTTATCAA
GTGTATCGGC ATGTGGTGGG TACTGATCCT GAGCAAGATA AATTAATTTA TCAGGAATCA
GACGACACTT TTTATGTCAG CTTGGAAAAA ACCACGTCTG AACGTTTTAT TCTGATTCAC
CTTAGCAGCA CGACGACGTC TGAGATTTTG TTGCTGGATG CTGATCTGCC TGAGCCGGTA
CCGCAGGTTT TTGCGCCACG CCGTAAAGAC CATGAATATG GTGTAGACCA CTATAAACAG
CACTTCTATA TTCGCTCCAA TAAAGAGGGG AAGAATTTCG GGCTCTATAA AATTGAAGAC
AGCCAAGGGT GCAGTGACTT TGCCGATGAG TCTCAATGGG CGTTACTGAT TGCACCAAGA
ACGGACGTTA TGCTGGAAGG ATTCAGTTTA TTCCGCGATT GGCTGGTGGT CGAAGAACGC
AGTGAAGGGT TGACGCACCT ACGGCAAATC CATTGGTCTA CTGGAGAAGA AAAATCCATC
ACTTTTGATG ATCCAACCTA CGTAACGTGG CTTGCTTACA ATCCAGAACC AGAAACGGCA
CTGTTGCGCT ATGGTTACTC CTCAATGACC ACGCCAAGCT CCATGTTTGA GATTAATATG
GACAGTGGTG AGCGCCAGTT ACTAAAGCAA CAGGAAGTAA AGGATTTCAC CCCTGAAAAG
TATCGCAGTG AACGTATTTG GGTTACCGCA TCTGATGGTG TGAAAATACC GGTTTCGTTG
GTTTATCATC GCGACTACTT TGTTTCTGGT AGCAATCCAT TATTGGTGTA TGCCTATGGT
TCGTACGGTA GCAGTATGGA TCCCGTCTTC AGCAGTAGCC GTTTGAGCTT ATTGGATCGC
GGTTTTGTGT TTGCTCTGGC ACACATTCGT GGGGGCGGAG AACTGGGGCA GCAATGGTAT
GAAGATGGCA AATTACTCAA CAAATTAAAT ACCTTCAGCG ACTTTACTGA TGTAACGAAA
GCCTTAGTGA ACGAAGGATA TGGGGATGCT CAGCGCGTTT TTGCGATGGG AGGCAGTGCC
GGAGGCTTGC TGATGGGCGT CATCGTCAAT CAGGCCCCTG AATTATATAA GGCGGTTGTG
GCACAGGTTC CCTTTGTTGA TGTGGTCACG ACCATGCTGG ATGAGTCGAT TCCACTCACG
ACAGGTGAAT ACGATGAGTG GGGCAACCCT AACGATAAGG TCTATTACGA TTATATTAAG
CAATATAGCC CTTACGATCA GGTTAAAGCG CAGGATTACC CGCACATGCT GGTAACGACT
GGGCTGCATG ATTCTCAAGT CCAGTATTGG GAACCCGCTA AATGGGTCGC TAAACTGCGT
GAAATGAAGA CTGATGACCA CCAATTACTG CTTTACACCG ATATGGACTC GGGCCATGGC
GGTAAATCAG GTCGCTTCAA AGCTTATGAA GATATTGCTT TGGAGTATGC ATTTATTCTG
TCGTTGATTT AA
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| Protein sequence | MMTPPKADKR PYPMTRHGDT RVDDYYWLRD DERTDADVLN YLQAENAFTA AVLKPQQQLR
ETLYQEMVGR IPPQEESVPY VRNGYRYQTR FEPGNEYAIY VRQPVSTDSD WETLLDGNQR
AEGHEFYTLG GLDVSPDNQL LAVAEDYLSR RQYDIRIKNL SSGGWHDEVI SNTSGGFEWA
NDSKTLYYVR KHEKTLLPYQ VYRHVVGTDP EQDKLIYQES DDTFYVSLEK TTSERFILIH
LSSTTTSEIL LLDADLPEPV PQVFAPRRKD HEYGVDHYKQ HFYIRSNKEG KNFGLYKIED
SQGCSDFADE SQWALLIAPR TDVMLEGFSL FRDWLVVEER SEGLTHLRQI HWSTGEEKSI
TFDDPTYVTW LAYNPEPETA LLRYGYSSMT TPSSMFEINM DSGERQLLKQ QEVKDFTPEK
YRSERIWVTA SDGVKIPVSL VYHRDYFVSG SNPLLVYAYG SYGSSMDPVF SSSRLSLLDR
GFVFALAHIR GGGELGQQWY EDGKLLNKLN TFSDFTDVTK ALVNEGYGDA QRVFAMGGSA
GGLLMGVIVN QAPELYKAVV AQVPFVDVVT TMLDESIPLT TGEYDEWGNP NDKVYYDYIK
QYSPYDQVKA QDYPHMLVTT GLHDSQVQYW EPAKWVAKLR EMKTDDHQLL LYTDMDSGHG
GKSGRFKAYE DIALEYAFIL SLI
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