| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2339 |
|---|
| Symbol | copC |
|---|
| ID | 5384635 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 2640775 |
|---|
| End bp | 2641161 |
|---|
| Gene Length | 387 bp |
|---|
| Protein Length | 128 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640865328 |
|---|
| Product | copper resistance protein CopC |
|---|
| Protein accession | YP_001401308 |
|---|
| Protein GI | 153949526 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2372] Uncharacterized protein, homolog of Cu resistance protein CopC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 0.221588 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTATTC GTAAAGTACG CTCATCTTGC CGCATGTTGT CGGCTCTTAT TGTGTTATTT
GTTGGCCTTT CTAGCCAGCA AGCGCTTGCT CATGCGCATT TAAAAGCGGA GACCCCGGCT
GCAGATACCA CTATAAATGC TGCACCTGAA GCCTTAACGT TGGGCTTCTC TGAGGGCATT
GAGCTGAACT TCAGTGGTGT TAAAGTCACG GGGCCGGATA ATAATGTGGT CAAAACCGGT
GATCTTAAAT TGGATCCCGC GAATAACACT CAACTGATTT TGCCGATTGG CCATGCTTTA
GCTGCTGGAA AATATCATGT CTCATGGCAC GTTGTCTCGG TTGATGGCCA TAAGACGAAA
GGCACTTACA GCTTCACTGT GAAATAG
|
|---|
| Protein sequence | MFIRKVRSSC RMLSALIVLF VGLSSQQALA HAHLKAETPA ADTTINAAPE ALTLGFSEGI
ELNFSGVKVT GPDNNVVKTG DLKLDPANNT QLILPIGHAL AAGKYHVSWH VVSVDGHKTK
GTYSFTVK
|
|---|
| |