| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2310 |
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| Symbol | |
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| ID | 5385633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 2612865 |
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| End bp | 2613926 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640865297 |
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| Product | carbohydrate ABC transporter permease |
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| Protein accession | YP_001401279 |
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| Protein GI | 153948466 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCTGCA AACAATTAAC TCGCCGTATC AAACAATTAA CTCGCCGTAT GTTGAACGAT
AAGCAACTTA ACTTCTTGGT CATGGTCAAT ATGTTGGTTA TTACGGTGGC CGCTACCCTT
ACCCAAGGGG CCTTTGTCGA TCTCTACAAT CTACAAACGA TGGCGGGGCA GGTCCCTGAA
TTGGGCTTGC TGGCGATGGG GGTCATGCTG GCCATGATCG TGGGTAATGG GGGGATTGAT
CTCTCGGGTA TCGCTCTCGC TAATCTGGCG GCGGTAGTCG CCGGCACGCT CACACCGGGG
TGGGTCAATG CTGTTGATAG CCCTTTGCTG TTTACCGTGG TTTTTGTCTT ATGCGCCTTG
TTGGTCGGTC TGACCGGGGG GCTAATCAAT GGGGTGCTCA TTGCTTACGC TAAACTCACG
CCGATCCTCT GCACCTTAGG CACTCAACTT ATTTTCACCG GCTTTGCTGT CGTGATTTCT
CATGGTAGCG GCGTTAAGAT TGGTTTTATT GAACCGCTGT CCTTTATTGG TGATGGCCTT
ATTGCCAATA TTCCGTTCTG TTTTGCGCTG TTTATCCTCC TCGCCACGTT GTTAGGTCTT
TGGTTACGTT TTAGTGCGAC CGGGATACGG CTATATCTCT TGGGAACCAA TCTTAAAGCT
GCACAGTATA TTGGCATTGC GCAACAACGG TTGCTGGTCG TCATCTATAC CTTATCAGGC
ACTTTAGCCG CTATCGCCGG CATTATTATT GCCGCCCGTT CTACCAGCGC TACCGCCGAT
TACGGTAGCT CTTATGTGCT GATTGCTATT TTGATCGCTG TGATGGCTGG GGTCCGCCCA
GAGGGGGGAT ATGGGCGAAT GGGCTGCCTA TTGCTATCGG CTACCGCCCT CCAGTTTCTT
TCCAGTACCT TTACTTTTCT GGACGTCTCC AGCTTTTTCC GCGACTGCGC TTGGGGCGCG
TTGTTGCTGT TCTTCATTAT TTTTTCCCGC ATTAATCCCT TGGATTTTGT TAAATCGTTA
TGGCGAAAAA ATACCCCGTC AGTGCAATCC CCCGTGCGCT GA
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| Protein sequence | MGCKQLTRRI KQLTRRMLND KQLNFLVMVN MLVITVAATL TQGAFVDLYN LQTMAGQVPE
LGLLAMGVML AMIVGNGGID LSGIALANLA AVVAGTLTPG WVNAVDSPLL FTVVFVLCAL
LVGLTGGLIN GVLIAYAKLT PILCTLGTQL IFTGFAVVIS HGSGVKIGFI EPLSFIGDGL
IANIPFCFAL FILLATLLGL WLRFSATGIR LYLLGTNLKA AQYIGIAQQR LLVVIYTLSG
TLAAIAGIII AARSTSATAD YGSSYVLIAI LIAVMAGVRP EGGYGRMGCL LLSATALQFL
SSTFTFLDVS SFFRDCAWGA LLLFFIIFSR INPLDFVKSL WRKNTPSVQS PVR
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