Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2288 |
Symbol | |
ID | 5384758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 2592981 |
End bp | 2593592 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640865275 |
Product | base excision DNA repair protein |
Protein accession | YP_001401257 |
Protein GI | 153950825 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTCTATA CCTACGGCGA AACAGAAATA AATCATCTGA AACGGCGGGA TAAAAAAATG GCCGCAGCTA TTGAGCGTTT GGGGATGTTA GAGCGCCCAT TATCGCCGGA CTTATTCGCT GCATTGATCA GAAATATTGT TGATCAGCAA ATTTCAGTTA AAGCGGCGCA AACCGTTAAT ACACGCTTAA CCCTATTATT GGGTAGCATC ACCCCCGCCA CCGTTGCCGC TGCCTCCGCC GAGGCGATTC AACGCTGTGG TATGACCATG AGGAAAGCGG GCTATATTAA AGGGGCGGCC GATGCGGCCA TTAATGGTTC GCTGGATTTA TCTGTTATTG CGCAATTGCC TGATAACGAG GTTATTACAC AGCTTTCACG TCTTGACGGC GTAGGGGTTT GGACAGCGGA AATGCTGTTG ATCTCCTCAT TGTCACGGCC AGATATTGTC AGTTGGGGAG ATTTAGCCAT CCGCCGCGGC ATGATGAATT TATATCGCCA TAAAACCCTG CCCCGTGAGC GTTTCGAGCG CTATCGCCGC CGATATACCC CATACGGAAC AACTGCCTCT CTTTATTTAT GGGCGTTGTC ACACAAAACG CTGGAGGATT GA
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Protein sequence | MFYTYGETEI NHLKRRDKKM AAAIERLGML ERPLSPDLFA ALIRNIVDQQ ISVKAAQTVN TRLTLLLGSI TPATVAAASA EAIQRCGMTM RKAGYIKGAA DAAINGSLDL SVIAQLPDNE VITQLSRLDG VGVWTAEMLL ISSLSRPDIV SWGDLAIRRG MMNLYRHKTL PRERFERYRR RYTPYGTTAS LYLWALSHKT LED
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