Gene YpsIP31758_2288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2288 
Symbol 
ID5384758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2592981 
End bp2593592 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content49% 
IMG OID640865275 
Productbase excision DNA repair protein 
Protein accessionYP_001401257 
Protein GI153950825 
COG category[L] Replication, recombination and repair 
COG ID[COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTCTATA CCTACGGCGA AACAGAAATA AATCATCTGA AACGGCGGGA TAAAAAAATG 
GCCGCAGCTA TTGAGCGTTT GGGGATGTTA GAGCGCCCAT TATCGCCGGA CTTATTCGCT
GCATTGATCA GAAATATTGT TGATCAGCAA ATTTCAGTTA AAGCGGCGCA AACCGTTAAT
ACACGCTTAA CCCTATTATT GGGTAGCATC ACCCCCGCCA CCGTTGCCGC TGCCTCCGCC
GAGGCGATTC AACGCTGTGG TATGACCATG AGGAAAGCGG GCTATATTAA AGGGGCGGCC
GATGCGGCCA TTAATGGTTC GCTGGATTTA TCTGTTATTG CGCAATTGCC TGATAACGAG
GTTATTACAC AGCTTTCACG TCTTGACGGC GTAGGGGTTT GGACAGCGGA AATGCTGTTG
ATCTCCTCAT TGTCACGGCC AGATATTGTC AGTTGGGGAG ATTTAGCCAT CCGCCGCGGC
ATGATGAATT TATATCGCCA TAAAACCCTG CCCCGTGAGC GTTTCGAGCG CTATCGCCGC
CGATATACCC CATACGGAAC AACTGCCTCT CTTTATTTAT GGGCGTTGTC ACACAAAACG
CTGGAGGATT GA
 
Protein sequence
MFYTYGETEI NHLKRRDKKM AAAIERLGML ERPLSPDLFA ALIRNIVDQQ ISVKAAQTVN 
TRLTLLLGSI TPATVAAASA EAIQRCGMTM RKAGYIKGAA DAAINGSLDL SVIAQLPDNE
VITQLSRLDG VGVWTAEMLL ISSLSRPDIV SWGDLAIRRG MMNLYRHKTL PRERFERYRR
RYTPYGTTAS LYLWALSHKT LED