| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2287 |
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| Symbol | |
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| ID | 5387057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 2589866 |
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| End bp | 2592820 |
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| Gene Length | 2955 bp |
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| Protein Length | 984 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640865274 |
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| Product | HAMP domain-containing protein |
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| Protein accession | YP_001401256 |
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| Protein GI | 153949322 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2206] HD-GYP domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCAGTA ACTGGTTCGG ATTAAAAAGC CGCTATCCTT TGCACATTCA AATTGCTGTT
CTCTTTACGC TCCTGATTGT CTCAATCGGC ACGGTTATTA TTATTTATAA CCACAACCAG
TTGACTAAAC TCACTGAAAT TAGCACTCAT CAACAGTACC AAAAAACCGG TGAGGCCATT
GCCGCCGAGT TAGAGGCTAT TACTCGCCCG ATGATGATGT CAGTCAATAT TCTTGCCAGT
ATGCAAATCA CCGAATTGCC GACCCTTGAG CAACGCATTA GTTTTATTGA TAAATTTATT
GAGATCCTAC AGCAGAATAA CTATGCCAGT GCCGTATACA GCGCTTACCC CAATGGGGAT
TTTTTTATGT TGCGGCCAAT GACCGAGGCT AACCGGGTGC TATTTCACGC GCCTGAAAAC
GCGGAGTGGA TGATTCAAAG TAATCGCTAT CTTGATAGCC TGCCTGAGAA GCGATTTATT
TATCTCAATC ACGACCAAAA GATTATTGCT GTCATGCTGC GAGATAATGA TGGCTACGAC
CCCCGACGGC GAGATTGGTT TATTTTAGCG TCACAAAATG CATCACTGAA CACCTCACCG
AACTATATTT TCAAAGGGAC GGGCGAAATA GGCTTTACCT ATAGTCGTCG TGCGGAGAAT
AAACAGGCGA TCATTGGATT GGATGTTTCT TTAGCCTCGT TATCTCAATT TTTAGCTAAA
CAAAACCTAC CACCAGGCAG CCAGGCGATT ATTATTAACT CCCGCGATGA AGTGATCGCC
AGTCTACCGA AGAAAAAAAA TGAAGCGGCA CAGAGTCCTA TTACAGGTAA ACAAGTACCG
ATATTACAGG CATTAATCGA CTCTCCAGCC CCCCCCGCCG ATGGCCGTCA CACTAAAGGC
CATAATAGCA GTGTTATATT TGAGGCACAG GATCAGTCTT GGTATGGCTC TATTGTTGAT
ATCAATAATA ATGGTAACCA GTATCAACTG GTTATTGCCA CCCCAGCGGC CTATCTGACG
GCAGAGGCAA ATGCTATCCG TAACCGCTCA ACATTAATTG CTTTTATTCT ATTAATGCTC
AGTTTGCCTA TTATCTGGTA TTTCTCACTA AGAATATCTA AACCCCTTAT TCGCTTACGA
CAAGATGCTG ATGCCATCAG TCATCTGCAT TTTGAGGAGA ATGAATTAGA ACATTCAGCT
ATTGAGGAAG TCGATGAGCT ACATAAATCA ATGTCTAAAA TGAAACTGAC TCTGAAGCAA
TTTATTTCAA TGGGCAATAT GCTGACCTCA GAAAGCAATT TTTTCCGTCA AATGCAGGGG
CTACTGAGTG AGACAACCGA AATCGCCTCC ATGACCGGTG GAATTATATT TTTGGCCGAT
AAAGAGGTGG GGACATTTAC CCCAACCGCC TTTCGTTGGA ACAGTGAAAA TATCCCAGTA
TCAGGGATGC CATCGTTGCA GGTTAATGAA GATAACTTCA ATATTTTTAA TCCTGTACTG
GAAGGGAAAA CCATTACGGG AACGTTAAAT AAAGAAAATA TACTCAGCCA ATTGCGCGAT
TTTTTGCACC CTTACTTACC GCTGCGCTTT GTCGCCGTCC CCATGCGAAC CCATGATGAT
CAATTGTTAG GTTTTTTGCT GTTATTCAAC CCTTATGAGT TAAATGCAGC ACGTGAACGT
TCAAAAATTC AACTGGTTAA TGCTTTAGTG GGCAGCTTAT CTATTTCAGT AGAAACTCAG
CGCTTGCTGC AAGAACAAAA AAATCTGCTC AATGCCTTTA TTGAGCTTAT TGCCGGAGCA
ATAGATGCCA AGAGTGCCTA TACCGGAGGG CACTGCCAGC GCGTACCTGA AATAACAAAA
ATGCTCGCCA GAGCAGCGAT GGAGAGTAAA GAAGGGCCAT TCGCCGACTT TAATTTATCT
GAGGATGAGT GGGAAGAACT GCATACCGCT TGCTGGTTAC ATGATTGCGG CAAAATAACC
ACGCCAGAGT TTGTCGTCGA TAAATCGACC AAATTAGAGT TAATCTATGA CCGTATTCAC
GAAATACGCA TGAGGTTTGA AGTGCTAAAA CGTGAAAAAG AAATTGCTTT CTTACGTCGT
CATCGCACGA TTATCGCCAA TGAGGCTGAG CAACAACAAC TGTCTGATGA ATTACACCAG
TTAGATGATG ATTTCTATTT TATCGCTCAT TGCAATGTCG GTGGCGAATT TATGTCTGAT
GAGGCGATAG CCCGGATCCA GCATATTGCC CGCTATCATT GGACCAGAAC CTTGGATGAT
ACCGCAGGCA TTTCAAATGA AGAGCGAGTA CGCAAAGACA GGCAACCAAT CAGCGCCTTA
CCTGTGCAAG AGCCCATGTT AGCGGATAAA GAAGAGCATA TTATTTATCG AGATAATAAA
AATAAACGTT CAGAATATGA TGATTTTAAA GTTAAAGAAC CAACCTTCCT TTATAACCGA
GGAGAAATTT ACAATCTCTG TATTCGACGC GGTACGCTTA CCGAAGAAGA TCGCTATAAG
ATTAATGAGC ATATTATGCA GACCATTGTG ATGCTCAAAA AGCTGCCATT CCCTCGTTCC
ATGGCGAATG TCCCCGTTAT TGCTGGCGGC CATCATGAGC GTATGGATGG TAAAGGTTAT
CCTTATCAGC TCACCCGTAG CCAAATGAGT ATTCCTGTCC GTATGATGGC CATAGCTGAT
GTTTTCGAGG CACTCACCGC AGCCGATCGG CCTTATAAAT CGGGAAAAAT GTTATCAGAA
GCCCTTAATA TCATGGTGAG TATGGTGAAT GAAAGCCATC TGGATCGGGA ACTGTTTATC
TTATTTCTGC AATCAGGTAT CTGGCATGAC TATGCTGCGG CTTATTTACA CGCCGAGAAA
GTCGATAGTA TTGATATCAC TATTCTGCTG CAAAGAGTCG GTTATCAATC TGTCTCGCTG
CCTGAATCGG CCTAA
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| Protein sequence | MFSNWFGLKS RYPLHIQIAV LFTLLIVSIG TVIIIYNHNQ LTKLTEISTH QQYQKTGEAI
AAELEAITRP MMMSVNILAS MQITELPTLE QRISFIDKFI EILQQNNYAS AVYSAYPNGD
FFMLRPMTEA NRVLFHAPEN AEWMIQSNRY LDSLPEKRFI YLNHDQKIIA VMLRDNDGYD
PRRRDWFILA SQNASLNTSP NYIFKGTGEI GFTYSRRAEN KQAIIGLDVS LASLSQFLAK
QNLPPGSQAI IINSRDEVIA SLPKKKNEAA QSPITGKQVP ILQALIDSPA PPADGRHTKG
HNSSVIFEAQ DQSWYGSIVD INNNGNQYQL VIATPAAYLT AEANAIRNRS TLIAFILLML
SLPIIWYFSL RISKPLIRLR QDADAISHLH FEENELEHSA IEEVDELHKS MSKMKLTLKQ
FISMGNMLTS ESNFFRQMQG LLSETTEIAS MTGGIIFLAD KEVGTFTPTA FRWNSENIPV
SGMPSLQVNE DNFNIFNPVL EGKTITGTLN KENILSQLRD FLHPYLPLRF VAVPMRTHDD
QLLGFLLLFN PYELNAARER SKIQLVNALV GSLSISVETQ RLLQEQKNLL NAFIELIAGA
IDAKSAYTGG HCQRVPEITK MLARAAMESK EGPFADFNLS EDEWEELHTA CWLHDCGKIT
TPEFVVDKST KLELIYDRIH EIRMRFEVLK REKEIAFLRR HRTIIANEAE QQQLSDELHQ
LDDDFYFIAH CNVGGEFMSD EAIARIQHIA RYHWTRTLDD TAGISNEERV RKDRQPISAL
PVQEPMLADK EEHIIYRDNK NKRSEYDDFK VKEPTFLYNR GEIYNLCIRR GTLTEEDRYK
INEHIMQTIV MLKKLPFPRS MANVPVIAGG HHERMDGKGY PYQLTRSQMS IPVRMMAIAD
VFEALTAADR PYKSGKMLSE ALNIMVSMVN ESHLDRELFI LFLQSGIWHD YAAAYLHAEK
VDSIDITILL QRVGYQSVSL PESA
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