| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2280 |
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| Symbol | fliA |
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| ID | 5386089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 2583679 |
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| End bp | 2584401 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640865267 |
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| Product | flagellar biosynthesis sigma factor |
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| Protein accession | YP_001401249 |
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| Protein GI | 153949581 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 50 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTGATT TGTATACCGC CGAAGGCGTG ATGGATAAGA ATTCCCTCTG GAAACGCTAT
GTTCCTTTGG TTCGCCATGA AGCATTGCGT CTACAGGTGC GTCTACCCGC CAGCGTGGAG
TTGGACGATT TATTGCAGGC TGGGGGGATT GGCCTGCTGA ATGCTGTCGA GCGCTATGAT
GCTTTACAAG GCACCGCGTT TACTACGTAT GCGGTACAGC GCATACGGGG GGCGATGCTG
GATGAACTGC GTAGCCGTGA TTGGGCACCT CGCAGTGTGC GCCGTAATGC ACGGGAAGTG
GCCAGTGCCA TGCAGCAAGT CGAACAGCGA GTAGGGCGTC CGGCGACCGA ACAGGAAGTC
GCGCAGGTTC TTGATATTGG CTTGGTTGAG TACCGCCAGA TCCTGTTGGA CACCAACAAT
AGCCAACTTT TCTCCTACGA CGAATGGCGT GAAGAGCACG GCGAAAGTGT CGAACCCCTG
TTGGAAGGGC ATGAAGATGC CAATCCACTA AAACACTTGT TGGAAGGTAA TCTGCGTCAG
CGCGTGATTG AAGCGATAGA GGCGTTGCCA GAACGCGAAA AAATGGTGCT TACGTTGTAT
TACCAGGAAG AGCTGAATTT GAAAGAAATT GGTGCGGTGC TTGAAGTTGG GGAGTCCCGC
GTCAGTCAAC TTCATAGCCA AGCGATAAAA CGCTTACGCG CCCGCCTAAA TAACGACGCT
TAA
|
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| Protein sequence | MSDLYTAEGV MDKNSLWKRY VPLVRHEALR LQVRLPASVE LDDLLQAGGI GLLNAVERYD
ALQGTAFTTY AVQRIRGAML DELRSRDWAP RSVRRNAREV ASAMQQVEQR VGRPATEQEV
AQVLDIGLVE YRQILLDTNN SQLFSYDEWR EEHGESVEPL LEGHEDANPL KHLLEGNLRQ
RVIEAIEALP EREKMVLTLY YQEELNLKEI GAVLEVGESR VSQLHSQAIK RLRARLNNDA
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