Gene YpsIP31758_2272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2272 
Symbol 
ID5384863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2579304 
End bp2580065 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content50% 
IMG OID640865259 
Productputative amino-acid ABC transporter ATP-binding protein YecC 
Protein accessionYP_001401241 
Protein GI153947672 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACCA TTGATATTAA AAAATTGACC AAGCAGTTTA AGGGTCAACA GGTGCTGCAC 
GGTATCGATC TTGAAGTGAA TAGCGGTGAA GTGGTGGCGA TTATTGGCCC TAGCGGGTCA
GGAAAAACCA CTTTATTACG TTGTATCAAT CTACTGGAGA TCCCCGATTC AGGGATAATT
CGGGTAGGCA ATATTGAGAT TAATGGCAGC ATCCACATCA GCAAGCAGCA ACGTCAGGTC
CGTGCCTTGC GGCAACAAGT GGGGTTTGTC TTTCAGGGTT TCAATTTGTT CCCCCATCGC
ACGGTGCTGG AAAATATCAT TGAAGGGCCC GTGATTGTTA AGGGTGAAGT GCGGGGTTCG
GCAGAAAAGC GCGGCCGTGA GTTGCTGGCA AAGGTAGGAT TAAGTGGTAA AGAGGATACC
TATCCGCGCC GTTTATCTGG TGGGCAACAA CAACGGGTCG CAATAGCGCG TGCGTTGGCA
ATGCAGCCTC AGGTTATCCT GTTTGATGAA CCTACCTCTG CATTGGATCC CGAGCTGGTG
GGTGAAGTAC TCAGTACCAT ACGTGCGTTA GCCGAAGAGA AACGCACAAT GGTTATTGTG
ACCCATGAAA TGAGCTTTGC CCGCGATGTG GCAGACAGGG CTATTTTTAT GGACCACGGG
CAGATTGTTG AGCAAGGCCC GGCGAAAGCA CTGTTTTCCC ACCCGCAGCA TGACCGTACC
AAACAGTTCC TTGATAAATT CCTGAATAAC CCAGACTGCT GA
 
Protein sequence
MSTIDIKKLT KQFKGQQVLH GIDLEVNSGE VVAIIGPSGS GKTTLLRCIN LLEIPDSGII 
RVGNIEINGS IHISKQQRQV RALRQQVGFV FQGFNLFPHR TVLENIIEGP VIVKGEVRGS
AEKRGRELLA KVGLSGKEDT YPRRLSGGQQ QRVAIARALA MQPQVILFDE PTSALDPELV
GEVLSTIRAL AEEKRTMVIV THEMSFARDV ADRAIFMDHG QIVEQGPAKA LFSHPQHDRT
KQFLDKFLNN PDC