Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2272 |
Symbol | |
ID | 5384863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 2579304 |
End bp | 2580065 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640865259 |
Product | putative amino-acid ABC transporter ATP-binding protein YecC |
Protein accession | YP_001401241 |
Protein GI | 153947672 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 55 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTACCA TTGATATTAA AAAATTGACC AAGCAGTTTA AGGGTCAACA GGTGCTGCAC GGTATCGATC TTGAAGTGAA TAGCGGTGAA GTGGTGGCGA TTATTGGCCC TAGCGGGTCA GGAAAAACCA CTTTATTACG TTGTATCAAT CTACTGGAGA TCCCCGATTC AGGGATAATT CGGGTAGGCA ATATTGAGAT TAATGGCAGC ATCCACATCA GCAAGCAGCA ACGTCAGGTC CGTGCCTTGC GGCAACAAGT GGGGTTTGTC TTTCAGGGTT TCAATTTGTT CCCCCATCGC ACGGTGCTGG AAAATATCAT TGAAGGGCCC GTGATTGTTA AGGGTGAAGT GCGGGGTTCG GCAGAAAAGC GCGGCCGTGA GTTGCTGGCA AAGGTAGGAT TAAGTGGTAA AGAGGATACC TATCCGCGCC GTTTATCTGG TGGGCAACAA CAACGGGTCG CAATAGCGCG TGCGTTGGCA ATGCAGCCTC AGGTTATCCT GTTTGATGAA CCTACCTCTG CATTGGATCC CGAGCTGGTG GGTGAAGTAC TCAGTACCAT ACGTGCGTTA GCCGAAGAGA AACGCACAAT GGTTATTGTG ACCCATGAAA TGAGCTTTGC CCGCGATGTG GCAGACAGGG CTATTTTTAT GGACCACGGG CAGATTGTTG AGCAAGGCCC GGCGAAAGCA CTGTTTTCCC ACCCGCAGCA TGACCGTACC AAACAGTTCC TTGATAAATT CCTGAATAAC CCAGACTGCT GA
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Protein sequence | MSTIDIKKLT KQFKGQQVLH GIDLEVNSGE VVAIIGPSGS GKTTLLRCIN LLEIPDSGII RVGNIEINGS IHISKQQRQV RALRQQVGFV FQGFNLFPHR TVLENIIEGP VIVKGEVRGS AEKRGRELLA KVGLSGKEDT YPRRLSGGQQ QRVAIARALA MQPQVILFDE PTSALDPELV GEVLSTIRAL AEEKRTMVIV THEMSFARDV ADRAIFMDHG QIVEQGPAKA LFSHPQHDRT KQFLDKFLNN PDC
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