Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2265 |
Symbol | putP |
ID | 5388025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 2571766 |
End bp | 2573250 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640865252 |
Product | sodium/proline symporter |
Protein accession | YP_001401234 |
Protein GI | 153950836 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0591] Na+/proline symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family [TIGR02121] sodium/proline symporter |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCATGA ATACGCCGAT GCTGGTGACA TTTTTAGTTT ACATTTTGGG GATGATATTA ATCGGTTTGA TCGCCTATCG GGCGACCAAT AACTTCGATG ACTACATCTT GGGTGGCCGG CGTTTAGGCA GTGTCGTCAC CGCGTTATCC GCGGGTGCTT CCGATATGAG TGGCTGGTTA TTAATGGGGC TACCGGGTGC GGTTTTTTTG TCCGGTATTT CCGAAAGTTG GATAGCCATA GGCTTGACAA TCGGTGCTTA TCTTAATTGG AAATGGGTGG CAGGCCGTTT ACGGGTTCAT ACCGAAGCCA ATAATAATGC CCTGACATTA CCCGATTATT TCACCAGTCG CTTTGAAGAC AAGAGTAAAT TACTGCGGGT CATATCCGCT GTGGTTATCT TAGTCTTCTT TACTATTTAC TGTGCTTCAG GGATTGTGGC CGGTGCGCGT TTGTTCGAAA GCACTTTCGG TATGGACTAC GGAACCGCAT TATGGGCAGG GGCCGCCGCG ACCATCATCT ATACCTTTAT TGGGGGGTTC CTGGCCGTAA GCTGGACAGA TACTGTACAG GCGACGTTAA TGATTTTCGC CCTGATCCTG ACGCCAATTA TCGTGATTCT TGCTGTTGGG GGGATAGATA CCTCAATGAT GGTGATCGCG GCGAAAAACC CCGCAAATAT TGATATGTTC AAAGGGTTGA ATCTGGTGGC GATCCTCTCG CTGTTGGGAT GGGGGTTGGG CTACTTTGGT CAGCCACATA TTTTGGCTCG CTTCATGGCG GCAGACTCTC ATCGTACTAT CCGTAGTGCC CGCCGTATTA GTATGACCTG GATGATTCTT TGTCTGGCGG GGACTATCGC AGTAGGCTTC TTTGGCATTG CTTACTTTGA AAATAACCCT GAGCAAGCAG GGAATGTGAG CCAAAATGGT GAGCGGGTAT TTATCGAATT AGCTAAGCTG CTGTTCAACC CGTGGATTGC CGGTATTCTG TTGTCAGCCA TTCTGGCTGC GGTTATGAGT ACCTTGAGTT GTCAATTATT GGTGTGCTCT AGCGCACTGA CCGAAGATTT ATATAAAGCA TTCTTGCGTA AAAAAGCCAG CCAAAAAGAA CTCGTCTGGG TGGGCCGTGC CATGGTGTTA TTAGTTGCAT TGATAGCTAT TGCACTGGCG GCAGATCCTG ATAATCGGGT CCTCGGATTA GTCAGCTATG CATGGGCAGG CTTCGGTGCA GCTTTTGGGC CAGTGGTCCT TATCTCGGTG CTGTGGCCAC GAATGACACG TAATGGTGCG TTGGTGGGAA TGCTGGTCGG TGCCATCACG GTGCTTGTCT GGAAACAGTA TGGCTGGTTA GATCTGTATG AAATTATTCC AGGCTTCTTG TTTGCCAGTT TGGCTATTTT TGTCGTCAGC CTGATGGGCC GCGAGCCAAG TAATGCCATC ACCGAACGTT TCCATAAAGC CGAGGCGGAG TTTAAAACAG TTTAA
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Protein sequence | MTMNTPMLVT FLVYILGMIL IGLIAYRATN NFDDYILGGR RLGSVVTALS AGASDMSGWL LMGLPGAVFL SGISESWIAI GLTIGAYLNW KWVAGRLRVH TEANNNALTL PDYFTSRFED KSKLLRVISA VVILVFFTIY CASGIVAGAR LFESTFGMDY GTALWAGAAA TIIYTFIGGF LAVSWTDTVQ ATLMIFALIL TPIIVILAVG GIDTSMMVIA AKNPANIDMF KGLNLVAILS LLGWGLGYFG QPHILARFMA ADSHRTIRSA RRISMTWMIL CLAGTIAVGF FGIAYFENNP EQAGNVSQNG ERVFIELAKL LFNPWIAGIL LSAILAAVMS TLSCQLLVCS SALTEDLYKA FLRKKASQKE LVWVGRAMVL LVALIAIALA ADPDNRVLGL VSYAWAGFGA AFGPVVLISV LWPRMTRNGA LVGMLVGAIT VLVWKQYGWL DLYEIIPGFL FASLAIFVVS LMGREPSNAI TERFHKAEAE FKTV
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