Gene YpsIP31758_2252 details

Gene Information

• Locus tag: YpsIP31758_2252
• Symbol: uvrC
• ID: 5387913
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: -
• Start bp: 2558158
• End bp: 2559990
• Gene Length: 1833 bp
• Protein Length: 610 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640865238
• Product: excinuclease ABC subunit C
• Protein accession: YP_001401221
• Protein GI: 153949922
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0322] Nuclease subunit of the excinuclease complex
• TIGRFAM ID: [TIGR00194] excinuclease ABC, C subunit

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.00000000000034144
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACTGATC TTTTTGATTA TAAAGAATTT TTGAAAACTG TTACTAGTCA GCCTGGTGTT 
TATCGGATGT ACGATACTGC AGGAACAGTT ATTTATGTCG GTAAAGCAAA AGATCTCAAA 
AAGCGTCTGA CGAGCTATTT TCGTGCTCAG GTCGCCAACC GAAAAACTGA AACGTTAGTT 
AAAAATATTG CTCAAATTGA TGTCACCGTT ACGCATACTG AAACGGAAGC ATTGTTGCTT 
GAGCACAATT ACATCAAGCT TTATCAGCCA CGTTACAATG TGTTGCTACG TGATGATAAG 
TCATATCCGC TTATTTTCTT GAGTGCGGAT GAGCACCCGC GCCTTGCTGT ACACCGTGGC 
GCAAAACATG AGAAAGGGGA GTATTTTGGG CCGTTTCCAA ACTCCTATGC AGTGCGTGAA 
ACGTTGGCAT TATTACAGAA GCTTTTTCCA GTAAGGCAAT GTGAGAATAG TGTTTACCGC 
AATCGCTCAC GGCCTTGCCT ACAATATCAG ATTGGGCGTT GTTCCGGGCC TTGTGTGGAG 
GGGTTGGTAA GTGAAGAGGA GTATCAGCGC CAAGTTGATT ACGTTCGCTT GTTCCTCTCA 
GGTAAAGATC AGCAAGTCTT GACGCAGCTA ATCACCCGTA TGGAGGAGGC TAGCCAGCAA 
CTGCATTTTG AAGATGCAGC ACGGATTCGC GATCAAATCC AAGCTGTGCG TCGAGTAACG 
GAACAACAGT TTGTTTCTGG CGACAGTGAA GATCTTGATG TTATCGGTGT GGCATTTGAT 
GCGGGGCTCG CTTGTGTCCA TGTACTGTTT ATCAGATTAG GGAAAGTATT AGGTAGCCGG 
AGTTATTTCC CTAAAGTTCC CGCGGGTACT GAGTTGAGCG AAGTCGTTCA GACTTTTGTT 
GGGCAGTTTT ATTTGCAAGG AAGCCAAGGG CGTACATTGC CTGGTGAAAT TTTACTGGAT 
TTTACCCTCA CAGAAAAAGA CCTGTTGGCA TCTTCTCTTT CTGAACTGGC TGGGCGAAAA 
ATTCAGATAC AAAGCCGCCC CCGAGGAGAT CGTGCGCGTT ATCTCAAGTT AGCACGTACC 
AATGCTTCAA CCGCATTGAT AACCCGCTTA TCTCAGCAAT CGACTATTCA TCAACGCATG 
AAGGAATTAG CCAAGGTCCT TAAGCTTGAT GAAATTAATC GTATGGAATG TTTTGATATC 
AGCCATACGA TGGGGGAACA GACCGTAGCC TCTTGTGTCG TATTTGATGC GAATGGTCCT 
GTACGATCTG AATATCGGCG CTACAATATT AGTGGTATCA CGCCGGGTGA TGATTATGCA 
GCGATGGCTC AAGTACTAAA ACGTCGATAT GGGAAAGCAT TAGACGATCA AAAAATTCCT 
GATGTCATAT TTATTGACGG TGGGAAGGGG CAGTTGTCAC AGGCCTTTGA TGTTTTTGCC 
TCGTTGAATG TTCCGTGGGA TAAGCAAAAG CCATTGCTAG TCGGTGTAGC GAAAGGTAGT 
GATCGCAAAG CGGGTTTAGA AACATTATTC TTGGCATCAG AAGGTGAGGG CTTTTCTTTA 
CCCCCAGATT CACCAGCATT ACATCTGATC CAGCATATTC GTGATGATTC TCATAATCAT 
GCGATAACCG GGCACCGGCA GCGGCGATCT AAAGTAAAAA ATACCAGTGC GTTAGAAATG 
ATAGAAGGTG TTGGCCCCAA ACGACGGCAA GTTTTGTTGA AATATATGGG TGGACTACAA 
CCTTTGTTTA ACGCAAGCGT CGAGGAAATT GCAAAAGTGC CGGGTATTTC ACAAGCATTG 
GCAGAAAAAA TCCACAATGC ATTGAAACAC TGA 

 

Protein sequence

MTDLFDYKEF LKTVTSQPGV YRMYDTAGTV IYVGKAKDLK KRLTSYFRAQ VANRKTETLV 
KNIAQIDVTV THTETEALLL EHNYIKLYQP RYNVLLRDDK SYPLIFLSAD EHPRLAVHRG 
AKHEKGEYFG PFPNSYAVRE TLALLQKLFP VRQCENSVYR NRSRPCLQYQ IGRCSGPCVE 
GLVSEEEYQR QVDYVRLFLS GKDQQVLTQL ITRMEEASQQ LHFEDAARIR DQIQAVRRVT 
EQQFVSGDSE DLDVIGVAFD AGLACVHVLF IRLGKVLGSR SYFPKVPAGT ELSEVVQTFV 
GQFYLQGSQG RTLPGEILLD FTLTEKDLLA SSLSELAGRK IQIQSRPRGD RARYLKLART 
NASTALITRL SQQSTIHQRM KELAKVLKLD EINRMECFDI SHTMGEQTVA SCVVFDANGP 
VRSEYRRYNI SGITPGDDYA AMAQVLKRRY GKALDDQKIP DVIFIDGGKG QLSQAFDVFA 
SLNVPWDKQK PLLVGVAKGS DRKAGLETLF LASEGEGFSL PPDSPALHLI QHIRDDSHNH 
AITGHRQRRS KVKNTSALEM IEGVGPKRRQ VLLKYMGGLQ PLFNASVEEI AKVPGISQAL 
AEKIHNALKH