Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2245 |
Symbol | |
ID | 5387238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 2552641 |
End bp | 2553684 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640865228 |
Product | hypothetical protein |
Protein accession | YP_001401214 |
Protein GI | 153949852 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.000000488792 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACAGCA CAAAACTTTT AATTAATGAA CCTCCGCTGC AGGTGCTTCC CTCACTTGCA AAAAAAATTG GCCTTAATGA AGCCATCCTA ATCCAACAAA TACATTATTG GCTATCTCGG TCTAATCATC AGCACGATGC CCGTAAGTGG TTTTATAAAT CAGCGGCTGA ATGGGCTGAT GAATTAGGTT TCTGGTCTGA TAGTACGATC AGACGTACGT TGGCAAATCT GCTGGAAATG AGGCTGATTT CGGTCAGGCA GTTACACAAA GTTTTACTGA ATGAGCCGTA TAATCGAACG AAGTGGTATT CAATAAATTA TGACCAGTTG GAGCAGCTTA ATTCTGCAAA TGCATCTGGT CAAAATGACA AATTGGGAAC TGGTCAGAAT GACCAAATCC CATGTGGTCA AAATGACCAA ATGTTCCAAG AGAATACAAC AGAGAATACA ACAGAGATAA ATACACCCCT TACCCCTAAA GGGAAAGATG ACGTGAGTAT TCTCACTAAT GCTAAAAAGG CTTTGGAATA CTACAACGAA CTCACTCACA CCCGATGTGA AGATCCGAGA CCGTTTGAAA CACTGCTGAC ACCAACAAAA TCACGAAACG CATACACATT GGAAGATTTG CAGTTGGTGA CGTATTGGGT CATAAACACG TGGAAGTCTC GTAACGGGAG ATATGCCAAA CCTGCAAATA TCTGTCGTGT GACCCGCTTT GACGGCTATC TGGCTGATGC CCGAGCATGG TCTATCTCTG CTGGAATTAT TGACTGTGAT TCTGTTATCG CTGTATTTAA TGGCGTTTTT GATGATGTTC TGCCTCCTGC CGAGCTGGAT CCTGACCGTA AACGCACTAT CTGTGAATTG CTCCAATACC TAAAAACAAA AGATCTTGAT GCATTCCAGA GCTACTTTGA AACTTTTCGT GATAAGGCTC CAGAGTTTTA TTTCGGGGGG GCGAGTGGGG AAGGTTGGCG GGCAAACTTT GATTATCTGA TGAAGCCTGA GGTTCTTAGA AAAACCCGAG ATGGTGCGTT ATGA
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Protein sequence | MDSTKLLINE PPLQVLPSLA KKIGLNEAIL IQQIHYWLSR SNHQHDARKW FYKSAAEWAD ELGFWSDSTI RRTLANLLEM RLISVRQLHK VLLNEPYNRT KWYSINYDQL EQLNSANASG QNDKLGTGQN DQIPCGQNDQ MFQENTTENT TEINTPLTPK GKDDVSILTN AKKALEYYNE LTHTRCEDPR PFETLLTPTK SRNAYTLEDL QLVTYWVINT WKSRNGRYAK PANICRVTRF DGYLADARAW SISAGIIDCD SVIAVFNGVF DDVLPPAELD PDRKRTICEL LQYLKTKDLD AFQSYFETFR DKAPEFYFGG ASGEGWRANF DYLMKPEVLR KTRDGAL
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