Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2206 |
Symbol | |
ID | 5384843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 2525056 |
End bp | 2526948 |
Gene Length | 1893 bp |
Protein Length | 630 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640865190 |
Product | lysozyme |
Protein accession | YP_001401176 |
Protein GI | 153946984 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4678] Muramidase (phage lambda lysozyme) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGGGTTT TTTTACGCCT ATACAACGAG GTTTCTATGT CTGAGACAAT TGATTCTCTC TTGGTTTCCC TTGGCCTGGA AACGGATGCA AAGAGCTTTC AAAAAGCCAA TGATGCCGTT AAAGGGATTA AAGACGGCAT ATTGCAACTG GCCGCCGCAG CCGGTACCGG TATCGGTTTA AAAGCCCTGA CTACTGATTT ATCTGCCTCA GTATTAGAAA TGGACAGGTT GAGTAAGATT ACCAACTTTA CCGTCAAGCA GATTGACGGC CTACGTTATG CGATGCGCAG TCTTGGCCTC AGCCCGGATG CGGCTAACCA GATTGTCCAG AAAATCCCTG ACTTACAACA ACGTGCCACT CAAGGCGAAT TAGGGGATAA AGCTTATTGG AATGGCTTAT TTAATCCCGC AGAGTTTGCC CTTAAAACCG GTATGGATTC ACTGACGTAT TTGATCAATG CATACGAGAA AATGAATAAC GATCAGCGGC GAAATCTACG TAACGGGATT AGTGCCGGTG ATAATGATCC GTTTACTCGC TTGTTAGAGG GGGGAATAAA GAAATTTAAT ACCTCACTAA AAAATTTTGA AGCGTTATAC AAACCGCTGG ATCCTAAACT TATCGACTCT GCCAATGCAT TCAATAAAGA GATGGCTACT TTGGCAACCA ATTTTGAGAA TCTGGCACGT TTAATGGGAA GAGACTTATT ACCAATAATT AATGCCTTAT TAGGGAGTAT TAATCAGTTT ATTAATGAAA ATCCTGAGGT GTCAAAAGCG ATTTTGACCG CAGCAGGGGT CGTGGGTACA GCGGGTGCAT TAAAGTTTGT TGGAGGAATA TTACCTCGTG CGGGAGGAAA ACCACCGGTC TCCGTTGCTG GTGAACGAGG ATGGACCTCG CGATTGTTGT TTAATCCAGT AACCATCGGG GTGACTGCCG CATTGACGCC CGGCAATATT TTCACCAGTG CTGATGATGC TAAAGCCATG AGCAATCCCG ACTCGCTCAA ACGTCAGAAT TGGGCTAAGA ATAATCCTGA TATCCCTTAT CTGGACGATA CCGATGGCCT TAATCGCCCA GCTAATTATC CAAATGTTCG CCAATATCCA GAGGTATTAG CCAACACGGG AGAAACGGCC AATTATAGCC CGCTATTGTA TGATACCCGT GACGACACAC AGCAATTAAA CCAGTTCACA CCAGCGGCCA ACAACCCAAA TAGCCCCGAG ATTTTTTATC AAAAAGGGAA TAACAACCTT AGCCATTTGG TTGACCACAC AAACGTTCGT CAGTATCTGG ACATGCTCGC TAAAGCAGAG GGAACGGCTG GTTATGCCAA TTCCGGTTAT AACACGTTGT TTGGTGGTGA CCAATTTTAT GATATCAGTG ACCACCCTCG AAAATTGATA GAGTTTAAGC AACCTGACGG TACCCCTAAT AAAACTTCTG CTGCAGGGCG GTATCAGTTC ACCAGAGACT CTTGGGATGA TGCTGCCAAA GCCCTTAATC TGACTGACTT CTCACCACGC AGTCAGGATA TTGCTGCATT GTTTCTTATC CAGCGAGCTG GCCAGTTAGA AAATGTCGTA AACGGTAATT TTGCTGATGC AACGGGTGAA TTAGGGGGTG TTTGGGCCTC ACTGCCATCG TCAAACTATG CACAACCGAA ACGTTCTTGG GAAGATATTC AGGGCTACTC TGACCGCCAG ATCACCCCAG TGCAACCAAT GGCTGCATCG TCTCCACGGG GAGATGTTCG GTTGGAACAA TATAATACTA TCAGTGTGGG CACTGTGGGT GGCGATGCGG ATTCTATTCG TAACGGTATA TTACAAGCCA CTACCCAGCT TGCACAGCAG GCGAGGGACC TGATGTATAC GGAGCACTAC TGA
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Protein sequence | MRVFLRLYNE VSMSETIDSL LVSLGLETDA KSFQKANDAV KGIKDGILQL AAAAGTGIGL KALTTDLSAS VLEMDRLSKI TNFTVKQIDG LRYAMRSLGL SPDAANQIVQ KIPDLQQRAT QGELGDKAYW NGLFNPAEFA LKTGMDSLTY LINAYEKMNN DQRRNLRNGI SAGDNDPFTR LLEGGIKKFN TSLKNFEALY KPLDPKLIDS ANAFNKEMAT LATNFENLAR LMGRDLLPII NALLGSINQF INENPEVSKA ILTAAGVVGT AGALKFVGGI LPRAGGKPPV SVAGERGWTS RLLFNPVTIG VTAALTPGNI FTSADDAKAM SNPDSLKRQN WAKNNPDIPY LDDTDGLNRP ANYPNVRQYP EVLANTGETA NYSPLLYDTR DDTQQLNQFT PAANNPNSPE IFYQKGNNNL SHLVDHTNVR QYLDMLAKAE GTAGYANSGY NTLFGGDQFY DISDHPRKLI EFKQPDGTPN KTSAAGRYQF TRDSWDDAAK ALNLTDFSPR SQDIAALFLI QRAGQLENVV NGNFADATGE LGGVWASLPS SNYAQPKRSW EDIQGYSDRQ ITPVQPMAAS SPRGDVRLEQ YNTISVGTVG GDADSIRNGI LQATTQLAQQ ARDLMYTEHY
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