Gene YpsIP31758_2206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2206 
Symbol 
ID5384843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2525056 
End bp2526948 
Gene Length1893 bp 
Protein Length630 aa 
Translation table11 
GC content46% 
IMG OID640865190 
Productlysozyme 
Protein accessionYP_001401176 
Protein GI153946984 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4678] Muramidase (phage lambda lysozyme) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGGGTTT TTTTACGCCT ATACAACGAG GTTTCTATGT CTGAGACAAT TGATTCTCTC 
TTGGTTTCCC TTGGCCTGGA AACGGATGCA AAGAGCTTTC AAAAAGCCAA TGATGCCGTT
AAAGGGATTA AAGACGGCAT ATTGCAACTG GCCGCCGCAG CCGGTACCGG TATCGGTTTA
AAAGCCCTGA CTACTGATTT ATCTGCCTCA GTATTAGAAA TGGACAGGTT GAGTAAGATT
ACCAACTTTA CCGTCAAGCA GATTGACGGC CTACGTTATG CGATGCGCAG TCTTGGCCTC
AGCCCGGATG CGGCTAACCA GATTGTCCAG AAAATCCCTG ACTTACAACA ACGTGCCACT
CAAGGCGAAT TAGGGGATAA AGCTTATTGG AATGGCTTAT TTAATCCCGC AGAGTTTGCC
CTTAAAACCG GTATGGATTC ACTGACGTAT TTGATCAATG CATACGAGAA AATGAATAAC
GATCAGCGGC GAAATCTACG TAACGGGATT AGTGCCGGTG ATAATGATCC GTTTACTCGC
TTGTTAGAGG GGGGAATAAA GAAATTTAAT ACCTCACTAA AAAATTTTGA AGCGTTATAC
AAACCGCTGG ATCCTAAACT TATCGACTCT GCCAATGCAT TCAATAAAGA GATGGCTACT
TTGGCAACCA ATTTTGAGAA TCTGGCACGT TTAATGGGAA GAGACTTATT ACCAATAATT
AATGCCTTAT TAGGGAGTAT TAATCAGTTT ATTAATGAAA ATCCTGAGGT GTCAAAAGCG
ATTTTGACCG CAGCAGGGGT CGTGGGTACA GCGGGTGCAT TAAAGTTTGT TGGAGGAATA
TTACCTCGTG CGGGAGGAAA ACCACCGGTC TCCGTTGCTG GTGAACGAGG ATGGACCTCG
CGATTGTTGT TTAATCCAGT AACCATCGGG GTGACTGCCG CATTGACGCC CGGCAATATT
TTCACCAGTG CTGATGATGC TAAAGCCATG AGCAATCCCG ACTCGCTCAA ACGTCAGAAT
TGGGCTAAGA ATAATCCTGA TATCCCTTAT CTGGACGATA CCGATGGCCT TAATCGCCCA
GCTAATTATC CAAATGTTCG CCAATATCCA GAGGTATTAG CCAACACGGG AGAAACGGCC
AATTATAGCC CGCTATTGTA TGATACCCGT GACGACACAC AGCAATTAAA CCAGTTCACA
CCAGCGGCCA ACAACCCAAA TAGCCCCGAG ATTTTTTATC AAAAAGGGAA TAACAACCTT
AGCCATTTGG TTGACCACAC AAACGTTCGT CAGTATCTGG ACATGCTCGC TAAAGCAGAG
GGAACGGCTG GTTATGCCAA TTCCGGTTAT AACACGTTGT TTGGTGGTGA CCAATTTTAT
GATATCAGTG ACCACCCTCG AAAATTGATA GAGTTTAAGC AACCTGACGG TACCCCTAAT
AAAACTTCTG CTGCAGGGCG GTATCAGTTC ACCAGAGACT CTTGGGATGA TGCTGCCAAA
GCCCTTAATC TGACTGACTT CTCACCACGC AGTCAGGATA TTGCTGCATT GTTTCTTATC
CAGCGAGCTG GCCAGTTAGA AAATGTCGTA AACGGTAATT TTGCTGATGC AACGGGTGAA
TTAGGGGGTG TTTGGGCCTC ACTGCCATCG TCAAACTATG CACAACCGAA ACGTTCTTGG
GAAGATATTC AGGGCTACTC TGACCGCCAG ATCACCCCAG TGCAACCAAT GGCTGCATCG
TCTCCACGGG GAGATGTTCG GTTGGAACAA TATAATACTA TCAGTGTGGG CACTGTGGGT
GGCGATGCGG ATTCTATTCG TAACGGTATA TTACAAGCCA CTACCCAGCT TGCACAGCAG
GCGAGGGACC TGATGTATAC GGAGCACTAC TGA
 
Protein sequence
MRVFLRLYNE VSMSETIDSL LVSLGLETDA KSFQKANDAV KGIKDGILQL AAAAGTGIGL 
KALTTDLSAS VLEMDRLSKI TNFTVKQIDG LRYAMRSLGL SPDAANQIVQ KIPDLQQRAT
QGELGDKAYW NGLFNPAEFA LKTGMDSLTY LINAYEKMNN DQRRNLRNGI SAGDNDPFTR
LLEGGIKKFN TSLKNFEALY KPLDPKLIDS ANAFNKEMAT LATNFENLAR LMGRDLLPII
NALLGSINQF INENPEVSKA ILTAAGVVGT AGALKFVGGI LPRAGGKPPV SVAGERGWTS
RLLFNPVTIG VTAALTPGNI FTSADDAKAM SNPDSLKRQN WAKNNPDIPY LDDTDGLNRP
ANYPNVRQYP EVLANTGETA NYSPLLYDTR DDTQQLNQFT PAANNPNSPE IFYQKGNNNL
SHLVDHTNVR QYLDMLAKAE GTAGYANSGY NTLFGGDQFY DISDHPRKLI EFKQPDGTPN
KTSAAGRYQF TRDSWDDAAK ALNLTDFSPR SQDIAALFLI QRAGQLENVV NGNFADATGE
LGGVWASLPS SNYAQPKRSW EDIQGYSDRQ ITPVQPMAAS SPRGDVRLEQ YNTISVGTVG
GDADSIRNGI LQATTQLAQQ ARDLMYTEHY