Gene YpsIP31758_2187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2187 
Symbol 
ID5385255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2509054 
End bp2510223 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content54% 
IMG OID640865172 
Producttail sheath protein 
Protein accessionYP_001401158 
Protein GI153948258 
COG category[R] General function prediction only 
COG ID[COG3497] Phage tail sheath protein FI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGATT ATCATCACGG CACGCGCGTC ATTGAAATTA GCGAAGGCAC TCGCCCGATC 
CGCACTGTCA GTACGGCGGT AGTCGGGATG GTCTGTACTT CCGATGATGC TGACCCCACT
CTGTTCCCAC TCAATACCCC GGTATTACTC ACCGATGTGC TGGCCGCCAG CGGCAAGGCC
GGTGAAACCG GCACATTAGC CCATTCACTG GATGCTATCA GCGACCAAAC CAAACCACTG
ACCGTCGTTG TCCGGGTGGC GCAGGGTGAA ACCGAAGCTG AAACCACGTC CAATATTATT
GGCGGAATAA CACCGGATGG CCGTTATACC GGCATGAAAG CGCTGTTAGC GGCGCAGGGT
AAGTTTGACG TCAAGCCCCG TATTTTAGGG GTGCCCGGTC ATGACACTCT GGCGGTATCC
ACTGAGCTAC TTTCCATCGC TCAGAGCCTG CGTGCCTTTG CCTACATCAG CGCCTACGGT
TGCAAAACCA AAGAAGAGGC CATTATCTAC CGCGATAATT TCAGTCAGCG CGAAGCGATG
GTGATTTGGC CCGATTTCCT CAGTTGGGAC ACGGTCACTA ACGCTGAAAC CACCGCTTAC
GCCACGGCTC GCGCCCTCGG CTTGCGTGCC AAGATTGATA ATGATGTTGG CTGGCATAAA
ACGCTGTCTA ACGTCGGGGT GAATGGCGTC ACCGGTATCA GTGCGGATGT GTTCTGGGAT
CTGCAAAACA GCGCCACCGA TGCCAATTTA CTTAACAGCA AAGACGTCAC TACGCTGATC
CGCAAAGATG GTTACCGTTT TTGGGGTTCC CGTTCTTGTT CTGACGATCC GTTATTTGCC
TTTGAGAACT ACACCCGCAC CGCGCAAGTG TTAGCCGACA CCCTGGCCGA GGCCCATATG
TGGGCTAACG ATAAGCCGCT TACCCCGTCA CTGGCAAAAG ACATTATTGA GGGTATTCGC
GCCAAAATGC GCGAGCTGAA ATCATTGGGT TATCTGATTG ATGGTGACTG CTGGTACGAC
GACAGCGTAA ACGATAAAGA CACACTAAAG GCTGGCCGCC TGTTTATTGA TTACGACTAT
ACGCCGGTGC CGCCGCTGGA AGATTTAACC CTGCGCCAAC GCATTACTGA TCGTTATCTG
GCTAATTTCG CCGCCGCCGT TAACAGCTAA
 
Protein sequence
MSDYHHGTRV IEISEGTRPI RTVSTAVVGM VCTSDDADPT LFPLNTPVLL TDVLAASGKA 
GETGTLAHSL DAISDQTKPL TVVVRVAQGE TEAETTSNII GGITPDGRYT GMKALLAAQG
KFDVKPRILG VPGHDTLAVS TELLSIAQSL RAFAYISAYG CKTKEEAIIY RDNFSQREAM
VIWPDFLSWD TVTNAETTAY ATARALGLRA KIDNDVGWHK TLSNVGVNGV TGISADVFWD
LQNSATDANL LNSKDVTTLI RKDGYRFWGS RSCSDDPLFA FENYTRTAQV LADTLAEAHM
WANDKPLTPS LAKDIIEGIR AKMRELKSLG YLIDGDCWYD DSVNDKDTLK AGRLFIDYDY
TPVPPLEDLT LRQRITDRYL ANFAAAVNS