| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2169 |
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| Symbol | |
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| ID | 5385439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 2494708 |
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| End bp | 2495850 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640865156 |
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| Product | carbohydrate ABC transporter ATP-binding protein |
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| Protein accession | YP_001401142 |
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| Protein GI | 153949950 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.000263472 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGGTA TACGTCTGAG CAATGTGTTT AAACGCTTTC ATGACACACA AGTTATTAAT
CAGGTCGATC TTGAAATCAA AAACGGTGAA TTTTGTGTGT TTATTGGGCC ATCGGGTTGT
GGCAAATCAA CGTTGCTGCG CATGATTGCC GGACTGGAAA CGATATCTTC CGGCGAGATC
TCAATCGGCG ATAAGGTGGT GAACAAACTG GCCCCCGCTG ACCGTGGTGT GGCGATGGTG
TTTCAGAGCT ATGCGCTTTA TCCGCATATG ACCATTTATG ACAACATGGC GTTTAATCTG
AAGCTGGCTA AAACCGAACC GGCTGAGATA GAGCGCCGTG TTCTGAACGC TGCAAAGATT
CTGCAACTGG AGCTGTTGTT ACAGCGTTTG CCGAAGGCGC TGTCTGGTGG TCAGCGTCAG
CGCGTGGCTA TCGGGCGGGC GATTGTACGT AACCCCGATG TGTTCCTGTT TGATGAACCG
TTGTCCAACC TTGATGCTTC ACTGCGCGTC GCGACACGTG TTGAAATCGC CAAGCTGCAT
CATCAGTTGG GTAACACGAT GGTCTATGTG ACACATGATC AGGTAGAAGC GATGACATTA
GCGGATAAAA TTGTACTGCT GAACAGTGGT GCAGCGATGC TGAATGAAGG CTCAATCGCA
CAGACTGGCC ATCCGCTGGA ACTGTATCAC CATCCGGTGA ATGAGTTTGT TGCTGGTTTT
ATTGGGTCGC CGAAAATGAA TTTTCTGTCT GGCGAATTGG TAGCAGGAAA TGCGCAATGC
GCGAGTATTC GTCTAGGGGG CGTGCGGGAA ATCGAGGTTC AGGTGGATAC CGCCGCCGCT
CGTTCAGGTG AGCACGTTAA AGTGGGGATC CGCCCGGAGC ATCTGCGGCT CTGCGACCAA
GCAGAGGCAC ACTTAATCGG TCAAATTCAG CATATTGAAC ATCTAGGCGA AGCTGCTTAT
TTCTATGTTT CGGTAAACAA TTTTGATCCG ATGTTGGTAC GGCATTCAGA AGATCAGAAA
CTGGCGTTGG GTGATGACGT AGGGCTTATG ATACCGGCGC ACCATGCTCA CCTGTTTGAC
AACAAAGGCG TTGCTTTCCG CCGCACTGCA TCGGCAGTGC AGAAGCCGTT TTCAACCGCG
TGA
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| Protein sequence | MSGIRLSNVF KRFHDTQVIN QVDLEIKNGE FCVFIGPSGC GKSTLLRMIA GLETISSGEI
SIGDKVVNKL APADRGVAMV FQSYALYPHM TIYDNMAFNL KLAKTEPAEI ERRVLNAAKI
LQLELLLQRL PKALSGGQRQ RVAIGRAIVR NPDVFLFDEP LSNLDASLRV ATRVEIAKLH
HQLGNTMVYV THDQVEAMTL ADKIVLLNSG AAMLNEGSIA QTGHPLELYH HPVNEFVAGF
IGSPKMNFLS GELVAGNAQC ASIRLGGVRE IEVQVDTAAA RSGEHVKVGI RPEHLRLCDQ
AEAHLIGQIQ HIEHLGEAAY FYVSVNNFDP MLVRHSEDQK LALGDDVGLM IPAHHAHLFD
NKGVAFRRTA SAVQKPFSTA
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