| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2165 |
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| Symbol | |
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| ID | 5386366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 2489365 |
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| End bp | 2491929 |
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| Gene Length | 2565 bp |
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| Protein Length | 854 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640865151 |
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| Product | fimbrial usher protein |
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| Protein accession | YP_001401138 |
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| Protein GI | 153948123 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.795647 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTGACAC AAAGCTTGCT GGTCACCCAT ATTTCGTCAG CGGCGGATAA GAACAATCAA
GACGACTATA TATTTGATGA TGCGTTAGTG CGCGGTTCAT CACTCGGTTT AGGATCGATT
GCCCGTTTTA ATAAAAAAAA CAGTTACGAC GCGGGCCAGT ATCAAGTTGA TATGTATATG
AACAACAAAT TTGTTGATCG CCTAAAAATG CTGTTTGTTG ATAAAGATAA CAGTGTTGAA
CCTTGTCTGT CTGTTGCGCA ATTATTACAA GCGGGTGTAA AAGAAGAGGC CCTGAAAACA
GCAGATCCTA AAACGCCATG TTTGGCCTTC CAATCCATAC TTCCGGCCAG TGACTTTCGA
TTTGATCACG CTAAATTGCG TTTTGATCTG TCCATCCCTC AGAAATTTGT TAAAAACGTG
CCCCGTGGCT ATGTTGACCC GAAAAATCTC ACTGCAGGCA ATACGATTGG TTTCAGTAAT
TACAACTTGA ATCAATATCA CGTGGATTAC AACAAAGAGG GGATTAAGCG CACCACAAAC
TCTACTTATC TGAGTCTGAA CAGCGGTATC AATATCGGCA TGTGGCGTTT TCGTCAGCAA
GGATCCCTAC GTTATGACGC TAGCCGAGGG ACTAACTGGA CATCTAATCG TCTGTACAGT
CAGCGCGCCC TGCCGACTAT CGGTAGTGAA ATTACGCTGG GTGAAACCTT CAGTTCCGGC
CAGTTTTTCT CCAGTCTTGG TTTTCTCGGT GTCGCGCTGT CAACGGATGA TCGCATGTTA
CCCGAATCGC AACGGGGCTA TGCACCGGTT GTCCGTGGTA TTGCCAGAAC CAACGCGCGA
GTGACGGTTT ATCAAAACAA CCGTTCGATT TATCAAACCA CGGTATCACC AGGCGCATTT
GAATTTAATG ATTTATCGGT CACCCATTTT GGGGGGGACC TGACGGTTGA AATCAATGAA
GCTGATGGCA GTGTAAGCAC CTTTCAGGTG CCATTCGCCT CTGTCCCGGA ATCCCTACGC
CCCGGCTATT CACGTTATAG CTTTGCGGCC GGGCAGGTTC GCGATGTTGG CAATAACGAG
ACGTTCAGCG AGTTGACCTA CCAACAGGGT ATCAGTAATG CCATCACAGC TAACACAGGG
ATACGGCTGG CTTCGGGTTA CCAGGCTATC ATGCTGGGCG GTGTGTTTAC CCACTATATT
GGTGCGTTAG GTCTGAATAC AACCTATTCC CATGCCCGTT TACCCGATGG GGAACAGCAG
CAAGGCTGGA TGGCAAAAGC CTCTTTTAGC CGTACCTTTC AACCCACGAA TACCACGTTA
TCCGTGGCAG GTTACCGCTA TTCAACTGAC GGTTACCGTG ATTTAAGCGA TGTACTGGGC
GTGCGGGCGA CCAGCAATGA CAGTAGCTGG AATTCCAGTA CTTATCGGCA ACGGAGCCGG
GCTGAAATAT CCCTCAACCA AAATTTTCAC CGCTACGGTT CATTATATTT AACTGCCTCC
TCACAAGATT ATCGAGATGA TCGTTCAAGG GATTCACAGT TACAACTGGG TTATTCCAAC
ACCTTCTGGC GTAATACCAG TTTCAATCTG GCGATTTCAC AGCAGAAAAC CGGAGGCGCA
AATAAAATTT ACTTCGTTGA CCCAGGCAGT GGCATGCCAG CCTCAAATGG TGCGAACACA
CTAGCCACCC GTGAAACTGT GGCCCAAATG TCAATTTCCT TCCCACTAGG GGGTAGCTCG
TCTGCACCTT ATGTCTCGGC TGGCGCAGTA AACAGCAGAA CTAGCGGAGC CAGCTATCAA
ACCTCACTTT CGGGAACCAT GGGCAGTGAC CAAACCGCAG GCTACAGTGT GGATGTTGCC
CGTAACGAGC CAACCAACGA AAATACCTTA AGCGGCAGTT TGCAAAAACA GCTCCCGACC
ACCAGTTTGA GTGGCAGTGC CTCACGCAGC CCCGGTTACT GGCAAGGTTC TGCCAGCGCC
CGTGGATCGG TCGCATTCCA CCGTGGCGGC GTGACGCTTG GCCCTTACCT AAGCGACACT
TTCGCCCTGA TAGAAGCGAA GGGTGCCAGT GGTGCCAAAG TAATGTATGG GCAAGGGGCC
CGTATTGACC GCTTCGGCTA TGCATTGGTC CCGACATTGA CACCGTATCG CTACAACACA
CTCTCTCTCG ATCCCGATGG TATGGATTTC AATACTGAGT TGCAGGATGG AGAGCGACAG
ATTGCGCCTT ATGCTGGCTC TACGGTGAAA GTGACGTTCC GGACCCTCAA CGGTTATCCC
GCATTAATCA CCATTAAAAT GCCCGATGGC AGCCAATTGC CTATGGGAAC CGTCGTTTAT
AATTACAACG GCAAGGGCAC TAACGATAAG AATGACATCG TGGGTATGGT CGGGCAGTCG
AGCCAAGCCT ATCTACGGGC GGAGGAGCTC AGTGGTACCC TCACATTGGT GTGGGGAGAG
AGTAGCAAAG AACGCTGTCA GTTAGATTAC GATCTGGGTA AGCCGACGGA TAACGATAAA
CAGCTGTATA AACTCGATGC CTTGTGTGTC GCGGTACAGC AATAA
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| Protein sequence | MLTQSLLVTH ISSAADKNNQ DDYIFDDALV RGSSLGLGSI ARFNKKNSYD AGQYQVDMYM
NNKFVDRLKM LFVDKDNSVE PCLSVAQLLQ AGVKEEALKT ADPKTPCLAF QSILPASDFR
FDHAKLRFDL SIPQKFVKNV PRGYVDPKNL TAGNTIGFSN YNLNQYHVDY NKEGIKRTTN
STYLSLNSGI NIGMWRFRQQ GSLRYDASRG TNWTSNRLYS QRALPTIGSE ITLGETFSSG
QFFSSLGFLG VALSTDDRML PESQRGYAPV VRGIARTNAR VTVYQNNRSI YQTTVSPGAF
EFNDLSVTHF GGDLTVEINE ADGSVSTFQV PFASVPESLR PGYSRYSFAA GQVRDVGNNE
TFSELTYQQG ISNAITANTG IRLASGYQAI MLGGVFTHYI GALGLNTTYS HARLPDGEQQ
QGWMAKASFS RTFQPTNTTL SVAGYRYSTD GYRDLSDVLG VRATSNDSSW NSSTYRQRSR
AEISLNQNFH RYGSLYLTAS SQDYRDDRSR DSQLQLGYSN TFWRNTSFNL AISQQKTGGA
NKIYFVDPGS GMPASNGANT LATRETVAQM SISFPLGGSS SAPYVSAGAV NSRTSGASYQ
TSLSGTMGSD QTAGYSVDVA RNEPTNENTL SGSLQKQLPT TSLSGSASRS PGYWQGSASA
RGSVAFHRGG VTLGPYLSDT FALIEAKGAS GAKVMYGQGA RIDRFGYALV PTLTPYRYNT
LSLDPDGMDF NTELQDGERQ IAPYAGSTVK VTFRTLNGYP ALITIKMPDG SQLPMGTVVY
NYNGKGTNDK NDIVGMVGQS SQAYLRAEEL SGTLTLVWGE SSKERCQLDY DLGKPTDNDK
QLYKLDALCV AVQQ
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