| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2164 |
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| Symbol | |
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| ID | 5386505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 2488558 |
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| End bp | 2489289 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640865150 |
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| Product | pili assembly chaperone |
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| Protein accession | YP_001401137 |
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| Protein GI | 153949877 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCTTGA TTGCCCGCCA AATTATCGCC TGCTCGATGT TGCTGCTCAC CAGCGTATCC
TTATCGGTAC AAGCCAGTGT TGTCATGACA GGGACGCGTA TCATTTATCC TGAAGGCTCG
CGGGAAAAAG TATTACAGCT GAGTAATAAA GATGACCATC CTAATTTAGT CCAACTGTGG
ATGGATGATG GAAATAATCA ATCTTCACCC TCGAAAAGTG ATGTTCCTTT CGCACTGACA
CCACAAATAT TCCGGATGGA AGCCAACAGT GGGCAAGTTG TCCGTTTGAC TTACATTGCG
CATAATTTAC CCAAAAATCG TGAATCGGTT TTTTATCTTA ACTTTTTACA AATCCCCGCA
TTAAAAGCCG ATACGCAGCC GGATAATAAG TTGGTTTTGA TCGTCAATAA CCGACTAAAA
GTCTTTTTCC GCCCTGCAGC GTTAAAGGAA AATATCGATA CGCTAGGTGA AAAAATAAGC
GTCACCCTAG ATACAACGAC AGGTAACAAA ATTAAAGTAC ATAACCCAAC AGGTTATTAC
ATCAGCCTGC GCGATGCTAA AATTGTCAGT AACGGCAAAA CCGTTTCGTT TGCCACTAGT
GAAATGTTCG CGCCCGACTC TACCACTGAT TTGGCCCTGC CCATTGGGAT TAAAGCCAAG
AAAGGGGAAT TACTGATACT GAACGTAGTT AATGATTACG GTGCCACCAT TCCTAATAAT
TATTATCTGT AA
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| Protein sequence | MILIARQIIA CSMLLLTSVS LSVQASVVMT GTRIIYPEGS REKVLQLSNK DDHPNLVQLW
MDDGNNQSSP SKSDVPFALT PQIFRMEANS GQVVRLTYIA HNLPKNRESV FYLNFLQIPA
LKADTQPDNK LVLIVNNRLK VFFRPAALKE NIDTLGEKIS VTLDTTTGNK IKVHNPTGYY
ISLRDAKIVS NGKTVSFATS EMFAPDSTTD LALPIGIKAK KGELLILNVV NDYGATIPNN
YYL
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