| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2161 |
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| Symbol | |
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| ID | 5387898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 2483694 |
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| End bp | 2487554 |
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| Gene Length | 3861 bp |
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| Protein Length | 1286 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640865147 |
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| Product | sensor histidine kinase/response regulator |
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| Protein accession | YP_001401134 |
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| Protein GI | 153947703 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGGTC GTCAAGGATG TGATACCGGG CAGCCCTTGA CGATCCACAG TATCGCCAAC
AGCTACAATG ACGATTTGTT GCTCACCCCT GCCACCGATA CCCGCCAATC AAGCCGACGC
ACAGTTAAAG TCGGCGTGGT CATGGACGCG AATACCCCTT TTGTGGTTAA CCGCGATGAT
AATGCCATTG AAGGAATTGT TGCGGATTAC CTGAAGATAA TCAGCGATGC CAGCCAACTC
TCTTTTCAGA TGATTGGTTA CTGCGATTAC GGGCTGGTAT TAAATGCGTT GGAGAATGGC
CAAATTGATT TAATGGCAGG CACTCCCATG TTGGCCCAGC CGGGGCTAAT CGCTTCCCAT
GCTTTCTTCA CAAACCGGCA TGTTGAAGTT CGTAGCAAAA ATTGGGATCC TACCAAACGT
ACACATCCAG AAACCGTGGC TATTGTGAAT AATGAGCCAC TGTCTCCCGA GTTTCTCTTT
AATTATCACG CAGACCGAAT TGTTGCTTAC CCCAACCAAT TGCAAGGATT GCTCGCTGTT
GCCTATGGTA ATGCTGATGT CTTTGTGGCT AATGCAACAT CAGCAAATTA TTTAATTGAC
CAACTACAAT TGCTGACGCT GCAAATTCGA AATTTTGCAC CTTATCACCC TGCCCCTTAT
TCATTCCTGG CCAGGGAAAG TAATCAGAAG CTGATCGATT ACCTCAATCA AATTCTGGAA
TTATTACCCA CCCGCGCTAC TGGCGATATT CAACAGCGCT GGTTTGGTAG CAAGCATCAC
TACAATATCG ATGCTAAATT GCTGCTGACA GAACAAGAAA TCAGTTGGAT CCAACATCAT
CCGGTGGTGA CCTATATTGC CCCACTCGAT CTGGCACCGT TGATTTTCCG TGACCGCCGG
ACCGGTGAAA TGGCCGGTTT TTCTGTCGAT CTTATCGATA TCATTGCCCG TCGTACCGGG
ATTAAGTTTG ATCCGGTCTA TACCAAAGAT ACCGGCGAAG GTGTTCGCAG TTTTAAAGCT
GGCAAGGTCG ATTTATTACC GATTGTTGCT GTGCGCAATG GTCAGTATGG CAACAATCTC
TACTCCTCCT CAATAGCCCA ATCGCTATGG GGGATTATGA CCCGTGAAGA CCGCATGGAT
ATCAATAACG TCGGTGATCT GGCAGGAAAG CGGGTTGGGA TCCAGGCGGG CAGTGCCTCC
AGCAGCATTA TTGGTAACCC ACTGCTAGCA CAGAGAATTA CTTTTGTTGA AGCCCCAGAC
ACCATGACGT TAGTACGCTG GCTACAGCAA GGGAAAGTTG ACGCCGTCGT TAAAAACATG
ATGACCGCCA ACTACTTGTC AGCACAAAAT TTCAGCCCAA ATATCAAAAC CGTGGCGGTA
GCCGGTGAAG AGCCATTAAT GATGGCATTT GCCATACGCC CTGACCTGCC AGAATTAAAA
ACTATTATTG ATAAAGTCAT TGAATCTATC CCACCGGAAG AGTTCGATAA CCTAACCAGT
GAGTGGAGTA CTTTTAAACC AAAACCTATC AGTTTTGATG AAAGCTCACT GGATAACGAA
CTTCTGATGA TCGCGCTGAA AATAAGCTCG GGGCTGCTCT TGGTCTTCGG CTTGTATCTC
TGCTATTTGG TCTTCAATAA ACGCCGTCAG GCCAAATTGT TGCATGCCCG TTTATTGCAG
CAAGAGTCCA TTATCAATGC ATTACCGTTT GCCGTATTCA TTCGCACCGC GAGTGGTGAG
TTAGCCGTTT ATAACAGCCA CTTTGCTGAT GTGCACAGCG ATAAGCTTTA CGACATGCTC
AATCAAACTC ATGAGCCAGC ACATTGGCCA ATGACCAGCC CGCTTGATCG TGAAATTGAT
AAATATTGTC GCAGTGTATT ACTCAATAGA AAACCACAAC TTGTTGACTT ATCTGTAGAA
ATAAAGGGTG AGATACGGGA TATTTTTCTG TGGATTATTC CTCTTAATAA TGCGGAACAG
GGGTTGTTGG GCGGCTGGCT AGACATCAGT CAGCGCAAAA CTGTCGAACG GCAATTGGAA
GCGGCCCGTG TTGAAGCCGA AAGTGCTAAC CGGACCAAGA GTACTTTCCT CGCAACCATC
AGCCATGAGT TGCGTACCCC GATGTACGCG ATTATGGGGT TATTGGAACT GGAAATTCGC
AGTAACCGGC CTGTCGAAAA AGATACGCTA GTGACCGTGT CTAAATCTGC TCAATCACTG
ATGCTCCTGC TTGATGACAT CATCGATTCG GCTAAAATTG AAGCTGGTCA ACTGAGTATT
CATCCAACTG CGGTCGACTT CCATCAGGAA ATGGAGCGGA TGTTTACGCT CTATCAACCT
ATTGCCAATG AGCGCGGGTT ACGTTTCTCC GGTTGGTTGG ATGACCATAT CCCACCGTTA
TTGATGGCCG ATATGCTGCG AGTACGTCAG GTGATGGGCA ATTTGCTCGG TAATGCGTTG
AAGTTCACTG AGCAAGGCAG TGTTTCTGTT GATATTACTT GGGAACCAAG CGACGAACAG
CATGGTGTGA TGAATATTGA TATCACCGAT ACCGGTATTG GTATCTCCCC TGCCGCACAG
GCGACATTAT TTCAGCCATT CAGCCAAGCC AATGAGGGTA AATCGCCACG CTTCGGTGGG
TCCGGTTTAG GTTTATGGAT TTGCCACCAA TTGATTCATA AAATGGGGGG TAAAATAGCG
CTGGAAAGCC AATTAGGCAA AGGAACCAGC CTGCTTATCA CACTACCACT GAATATTGCG
ACTGCGGATG ATTTAGCCCA AGATGCGGCG ATAACACATG TTGATGATGA ACGGCTGAAT
CAACTGAGAA ACCTGCGAAT TCTGGTCGTT GATGATTTAC CCGCAAACCG CCAGTTACTT
CAACAACAGT TGGCCTTTAT TGGGATCGAG CAGGTAGTCA CCGCCGAAAA TGGGGCGAAA
GCCTGCCAAA TATTGCAGCA CAATAACTTT GATGTGGTAA TAACCGATTG CAGTATGCCG
GTGATGGATG GATATGAACT CGCAGCACAT ATTCGCCAGG ATCCAGCCTT AAAAGACCTC
ATCGTGATTG GGTGTACTGC TGACGCCCGC GAAGAAAGTG CAGCACGCTG CATTGATGCG
GGAATGAATG CCTGCATGAT CAAACCCGTG GCCATCGATA CTTTACAGGC GACCTTACTG
CGCAAAGATA TCGTGAGCCA GATTGCGAAT ACCAATCATA GCCACAGCAC AGAAGATAAT
GACCGCGGTG GCAACCAAAA TAATTTGAGT GAAAAAAATA CAACCCAGCA AGAAAATGCT
CCAGCTATCC ACAGCACAAC CATCACCTCT TCGGTTAATA GGCTAGCTGC GGCACAGAAT
AAGCTGCGGA CATTATCGGG GGGGAACCCT GCGGTAGAAT TGCAATTATT GCAATCATTG
CTGGAAAGCA ATTTGCAGGA TGCTGTCACA TTGACGCAAC TTTATCGCCA ACTCTGTGTA
GAAGACGAAG ACGTTGTGGA AACTGTAGAT ACTGCGGAAA CTGTAGATAC TGCGGATACT
GTGGAAGATG GGGAGACCAG AGGACCGGGT AGCACGGTAG GTCGTCATAG CACGGCAGGC
AGTGACCACA TCCCTCACGC AGATATTTAT AAACAGATGG CAAGCCTGGT ACACCGCATT
AAAGGCAGCG TACAACTGAT TGATGCTCAA GAACTGGTCG CAAGTTGCGT GAAGTTTGAA
TCTCAATTAC ATGCACAGAA TAAACAAGCA GCGATGACAC ATGGCGCTGA TTGTCTGGCA
TTGTTTATTG AATCTAATCA GTTATTAGTC ACATTAATTT CTCAATATCC TAAAGCCGCT
ACTGAAGACT CGCCACAATA A
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| Protein sequence | MTGRQGCDTG QPLTIHSIAN SYNDDLLLTP ATDTRQSSRR TVKVGVVMDA NTPFVVNRDD
NAIEGIVADY LKIISDASQL SFQMIGYCDY GLVLNALENG QIDLMAGTPM LAQPGLIASH
AFFTNRHVEV RSKNWDPTKR THPETVAIVN NEPLSPEFLF NYHADRIVAY PNQLQGLLAV
AYGNADVFVA NATSANYLID QLQLLTLQIR NFAPYHPAPY SFLARESNQK LIDYLNQILE
LLPTRATGDI QQRWFGSKHH YNIDAKLLLT EQEISWIQHH PVVTYIAPLD LAPLIFRDRR
TGEMAGFSVD LIDIIARRTG IKFDPVYTKD TGEGVRSFKA GKVDLLPIVA VRNGQYGNNL
YSSSIAQSLW GIMTREDRMD INNVGDLAGK RVGIQAGSAS SSIIGNPLLA QRITFVEAPD
TMTLVRWLQQ GKVDAVVKNM MTANYLSAQN FSPNIKTVAV AGEEPLMMAF AIRPDLPELK
TIIDKVIESI PPEEFDNLTS EWSTFKPKPI SFDESSLDNE LLMIALKISS GLLLVFGLYL
CYLVFNKRRQ AKLLHARLLQ QESIINALPF AVFIRTASGE LAVYNSHFAD VHSDKLYDML
NQTHEPAHWP MTSPLDREID KYCRSVLLNR KPQLVDLSVE IKGEIRDIFL WIIPLNNAEQ
GLLGGWLDIS QRKTVERQLE AARVEAESAN RTKSTFLATI SHELRTPMYA IMGLLELEIR
SNRPVEKDTL VTVSKSAQSL MLLLDDIIDS AKIEAGQLSI HPTAVDFHQE MERMFTLYQP
IANERGLRFS GWLDDHIPPL LMADMLRVRQ VMGNLLGNAL KFTEQGSVSV DITWEPSDEQ
HGVMNIDITD TGIGISPAAQ ATLFQPFSQA NEGKSPRFGG SGLGLWICHQ LIHKMGGKIA
LESQLGKGTS LLITLPLNIA TADDLAQDAA ITHVDDERLN QLRNLRILVV DDLPANRQLL
QQQLAFIGIE QVVTAENGAK ACQILQHNNF DVVITDCSMP VMDGYELAAH IRQDPALKDL
IVIGCTADAR EESAARCIDA GMNACMIKPV AIDTLQATLL RKDIVSQIAN TNHSHSTEDN
DRGGNQNNLS EKNTTQQENA PAIHSTTITS SVNRLAAAQN KLRTLSGGNP AVELQLLQSL
LESNLQDAVT LTQLYRQLCV EDEDVVETVD TAETVDTADT VEDGETRGPG STVGRHSTAG
SDHIPHADIY KQMASLVHRI KGSVQLIDAQ ELVASCVKFE SQLHAQNKQA AMTHGADCLA
LFIESNQLLV TLISQYPKAA TEDSPQ
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