| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2122 |
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| Symbol | |
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| ID | 5385829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 2437735 |
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| End bp | 2439156 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640865108 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001401095 |
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| Protein GI | 153949572 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACGAT ATGAACAGCT AGCGCAGCAA ATCAGAGCAC AAATACAATC GAAGGTCTGG
CAAGCGGGCG ATAAGCTCCC TTCGCTGCGA GAAAGTTGTA AACAATCAGG GCTAAGCCTG
ATGACCGTGG TGCAATCGTA TCAGTTGTTG GAAAGCCAGG GGTGGATCGT TGCCCGCCCA
CAATCGGGCT ACTATGTGGC CTCACGGCCC ACGCAGTTAC CGCAACCACA GCGGGGTAAT
AAGCTCCATC TGGATGAACA GGTTGATATC AATACCTTTA TTTTTAATGT ATTACAGGCA
GGGAAAGATC CGGCAATCAT GCCGTTCGGT TCAGCATTTC CAGATCCGAG TTTATTGTTA
CAACCGCGTT TGTCGCGGGC GTTGGCCAGC GTCGCTCGCA AGATCTCGCC ACAAAGTTCT
GTAACGAATT TGCCACCGGG TAATGAAAGT TTACGGCGCA ATATTGCGCA ACGTTATGCT
GCCTGCGGGA TGAATGTATC ACCCGAGGAA ATTGTGATTA CGGCGGGGGC GATGGAGTCA
CTGAGCCTTA GCTTACAAGC CGTGACACAG CCCGGTGATT GGGTCGTTAT TGAATCGCCA
GCATTTTATG GTGCATTACA GGCGATTGAA CGCCTACGAC TTAAGGCTAT TGCCATTACG
ACGGATCCCC AGCAAGGTGT GGATTTGGAG GCCCTTGAGC AGGTTATCAG CCAGTATCCG
ATAAAAGCGT GCTGGTTAAT GCCCCATTTT CAAAACCCAA TGGGGGCCAC CATGCCGTGG
TCACAGAAAC AGCGACTCGT CACCCTGCTA CAGCAGAAGG CTATTTCACT GATTGAAGAT
GATGTATATG GCGAACTGTA TTTTGGTGCT GAACGCTTGC TACCGGCAAA AGCGCTTGAC
CAGCATCGGC AGATTTTACA TTGCTCCTCT TTTTCTAAAT GCCTGGCGCC GGGGTTCCGT
GTGGGGTGGG TGGCAGCAGG TGAACATGCT CAGCGTATTC AACATTTACA GTTGATGAGC
ACCGTTTCGG CCAGCGTCCC GACCCAACTG GCGATTGCGG ATTATCTGAG CCAAGGGGGA
TACGATACTC ACCTGCGCCG CTTGCGTCGG GTAATGGAAC AGCGGATGAG CACGTTGCAT
CAGGCCGTTG TTGAACACTT CCCCAAAAAC ATCAAAATCA GCCACCCCGC TGGCGGCTAT
TTCTTATGGT TAGAATTGGA GCCACCTTTT AATGCCAGTG AACTGTACCG ACGGGCACTG
GAGCAGGGGG TTAGCATTGC TCCTGGGAGA ATGTTCACCA CAGGGAGTCA GTTTGATCAT
TGCTTTCGCC TTAATGCCTC CTTTGCCTGG TCAGAACAAA GCGCAAAAGC GATTCGTATT
TTGGCGAAGT TAATCGGCCA ATTGACGAAC GAACGTCGAT AG
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| Protein sequence | MTRYEQLAQQ IRAQIQSKVW QAGDKLPSLR ESCKQSGLSL MTVVQSYQLL ESQGWIVARP
QSGYYVASRP TQLPQPQRGN KLHLDEQVDI NTFIFNVLQA GKDPAIMPFG SAFPDPSLLL
QPRLSRALAS VARKISPQSS VTNLPPGNES LRRNIAQRYA ACGMNVSPEE IVITAGAMES
LSLSLQAVTQ PGDWVVIESP AFYGALQAIE RLRLKAIAIT TDPQQGVDLE ALEQVISQYP
IKACWLMPHF QNPMGATMPW SQKQRLVTLL QQKAISLIED DVYGELYFGA ERLLPAKALD
QHRQILHCSS FSKCLAPGFR VGWVAAGEHA QRIQHLQLMS TVSASVPTQL AIADYLSQGG
YDTHLRRLRR VMEQRMSTLH QAVVEHFPKN IKISHPAGGY FLWLELEPPF NASELYRRAL
EQGVSIAPGR MFTTGSQFDH CFRLNASFAW SEQSAKAIRI LAKLIGQLTN ERR
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