| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2117 |
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| Symbol | astE |
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| ID | 5384842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 2430838 |
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| End bp | 2431830 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640865103 |
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| Product | succinylglutamate desuccinylase |
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| Protein accession | YP_001401090 |
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| Protein GI | 153950226 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2988] Succinylglutamate desuccinylase |
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| TIGRFAM ID | [TIGR03242] succinylglutamate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 0.728086 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGATT TTTTAGCGAT AACCCTATCG GGTAAACCTC CACAAGTCAT ACAGGGTGAA
ACCGTTAATC TGAAATGGCA ATGGCTCGGT GAGGGGATAT TGACACTGGT TCCGCACCGC
AGCTACACAC AATCGGTGGT GATCTCTGCC GGTATCCACG GCAATGAAAC GGCACCCATT
GAAATTTTGA ATCAATTAGT CACCGATTTA TTAGCGGGTC AACTGCCGCT GTCCGTCCGT
CTGTTAGTGT TATTGGGAAA TCCACCGGCG ATCCGCAAAG GGAAGCGGTA CCTCAGCAAT
GACATTAACC GTATGTTTGG TGGGCGTTAT CAGCACTATA CACCCAGTGA CGAGACGCGA
AGGGCGAGTA CTCTGGAGCA ACGGGTGATG GCATTTTTCC AGGCAAGTCA CACATCAGAG
CGTTTGCATT ATGATCTACA CACCGCAATT CGGGGGTCCT ATCATCCTCG CTTTGGTTTG
TTACCCTACC AGCAGACCCC TTATTCCGCT GCTATGTTTC GTTGGTTGCG GGACATCGAA
CTGGATGCTT TGGTTATGCA CACCTCCGCA GGAGGGACAT TCGCTCACTT TAGCAGTGAG
CGCTGTCAGG CAGCCAGTTG TACGTTGGAG TTAGGCAAAG CATTACCTTT TGGTGAGAAT
CAATTATCAC AATTCAGTGC GATCACCCAA GGATTACGCT CCTTAGTCAG TGATAGTGCC
TTGCCTGCAC GTAAGACAGA GAACATGAAG TACTACCGGG TCGTTAAATC ACTGCTTAGG
CAACACCCTG ATTTTAAACT ACGGGTGGCT GAGGATACGG TAAATTTCAC ACGCTTCGCA
CAAGGCACTC TACTTACAGA ACAACCCAAT GATAACTATC GTGTTGAACA CCCCTATGAG
TGGATCTTAT TTCCAAATCC ACATGTTGCG TTGGGATTAC GGGCTGGGAT GATGTTGGTA
AAAATGTGTG AAAGTGAATT ACCGATTACA TGA
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| Protein sequence | MLDFLAITLS GKPPQVIQGE TVNLKWQWLG EGILTLVPHR SYTQSVVISA GIHGNETAPI
EILNQLVTDL LAGQLPLSVR LLVLLGNPPA IRKGKRYLSN DINRMFGGRY QHYTPSDETR
RASTLEQRVM AFFQASHTSE RLHYDLHTAI RGSYHPRFGL LPYQQTPYSA AMFRWLRDIE
LDALVMHTSA GGTFAHFSSE RCQAASCTLE LGKALPFGEN QLSQFSAITQ GLRSLVSDSA
LPARKTENMK YYRVVKSLLR QHPDFKLRVA EDTVNFTRFA QGTLLTEQPN DNYRVEHPYE
WILFPNPHVA LGLRAGMMLV KMCESELPIT
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