| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2108 |
|---|
| Symbol | |
|---|
| ID | 5388380 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 2419527 |
|---|
| End bp | 2420534 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640865094 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001401081 |
|---|
| Protein GI | 153949927 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
|---|
| TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGACAT TATTAATTTC AGCACCTCAT CTGGCGTTCA AAATTATCGC CACAGGGGTA
TCGTTACCCC CTGATAGGGT GGAATCCTCG ACGTTGGATC GTAAACTCAA TAAGCCTGTC
GGTTATGTAG AACAACGTTC TGGTGTCCGG CATCGTTATC ATGCGACGGC AGATGCTAAC
CAAGCTGAGT TAGCGGCGGC AGCACTGCAT GATGCCCTTG AGCGCCATGG GATCAATCCT
TCCTCAATCG ATTTATTAAT ATCAGCCTCG GCTATTGCCT ACCAGGCCCT ACCGTGCACG
GCGGTGCATA TTCTCAAAAT AGCGGGTCTG GCACCTCGCA TTGCTGGGTT TGATATCAAT
AGCAGTTGCG TGAGCTTTAT TTCCGCATTA CAGGTGGCTG CGGGGCTACT GAATGCCGGA
ACTTATCAGC GTATCGCTAT TGTTTCAGCC GATCTGGCAT CACGAGGTAT TGACTGGAAT
GATGAGGAGT CTTCGCTGAT CTTCGGTGAT GGTGCCGCAT GTGCCATTGT GGAACGAGGA
GATGGCCGCA GTAGCATATT AGCCAGTCTG GTTGAAATGT ATCCTACGGG CAGTGAGTTA
TGTGAGATTC GGGCGGGGGG CACACGATGC AACCCTCGCT CAGGTATGGA TAACGACGAT
TTCTTATTTC ATATGCAGGG CAAGAGGCTG TTCCGACAAG CCTCTGGTAT CATTGAAGAT
TATTTCCAGC GGCTATTGGA AAAAAGTGGG CTGACATTAG CGGATATTGC CACGGTAATT
CCGCATCAGG CGAGCCATTT ATCGCTGGCG CATATGCGCA AACGCTTACA TGTGCCAACA
GATGTGCTGG TGGATATCTA TCGAGATCAT GGTAACCAGG TGGCGGCATC GATACCAACC
GCATTGCATG CCGCCGTGAT GAGCGGGCGC TTTTCGCCGG GTAAACCGGT GATGCTTATT
GGTACCGCAG CAGGGTTGAC GCTGGCGGGG ATGGTTTTGC TGCCATGA
|
|---|
| Protein sequence | MSTLLISAPH LAFKIIATGV SLPPDRVESS TLDRKLNKPV GYVEQRSGVR HRYHATADAN
QAELAAAALH DALERHGINP SSIDLLISAS AIAYQALPCT AVHILKIAGL APRIAGFDIN
SSCVSFISAL QVAAGLLNAG TYQRIAIVSA DLASRGIDWN DEESSLIFGD GAACAIVERG
DGRSSILASL VEMYPTGSEL CEIRAGGTRC NPRSGMDNDD FLFHMQGKRL FRQASGIIED
YFQRLLEKSG LTLADIATVI PHQASHLSLA HMRKRLHVPT DVLVDIYRDH GNQVAASIPT
ALHAAVMSGR FSPGKPVMLI GTAAGLTLAG MVLLP
|
|---|
| |