Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2107 |
Symbol | |
ID | 5387136 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 2418497 |
End bp | 2419513 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640865093 |
Product | NAD-dependent epimerase/dehydratase family protein |
Protein accession | YP_001401080 |
Protein GI | 153948625 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 0.937319 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTCT TAGTGACAGG GGCAACCAGT GGATTGGGGC GCAACGCAGC ACAATGGCTG TTGGAGGCAG GGCACGAGGT CTATGCTATC GGGCGGGATC AACTGGCGGG GGAAGAACTG CGCAAGTTGG GCGCCACCTT TATCCCGCTG GATCTGACCA TGACCACGAT GGAGGTCTGC CAGCAATGGC TCAAAACGTG CGATGTGGTT TGGCACTGTG CCGCCAAATC AGCGCCGTGG GGTAACCCAC AGGATTTTCA CCAGACCAAT GTGGTGGTGA CGCATAAACT TGCTCAGGCC GCCGGTCGCG AGGGGGTTAA ACGGTTCATT CATATCTCAT CACCTGCCGT GTATTTCGAT TTTCGCCATC ATCATGATCT GCCTGAAACA TACCGGGCCA GCCGCTTTTC CAGCCACTAT GCCAGCAGTA AATATGCGGC GGAGCAGGTG TTGCATGAAT GTATCGCTCA TTATCCGGAC ACCACGTATG TGATCCTGCG CCCACGTGGG CTATTTGGTC CCCACGATAG GGTGATTGTG CCGCGTTTGC TGCAACAACT GAGCAGGGAT CGTAATGTGC TGCGTTTACC GGGAGGAGGG CAAGCGCAGC TTGATCTCAC GTTTGTGTTG AATGTGGTAC ATGCCATGAT GTTAGCCACT GATAACGACG GGCTACGCTC CGGTGCGATT TATAATATTA CCAATCAGGA GCCACAACGG CTGGTGACGA TGTTGGATTC TCTGTTGAAT CAGCAGCTTC ATATTAACTA TACCTTGCAG CCGGTGCCCT ACTCGTTACT TTCTGTCGTG GCGGCAGGGA TGGAGCTGGT CGCCAGTATG ACCCAGAAAG AACCGCTGTT AACCCGTTAC AGTGTTGGCG CAGTCTATTT TGATATGACC CTTAATTCAG AACGTGCTGT TAATGAACTG GGCTACCGGC CTCGTTACTC GATGGCGGAG GGGATTGTGC TGGCTGGCGA GTGGCTTAGC GCGCAGAGGA GTGGCCAGCA TGGCTAA
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Protein sequence | MKVLVTGATS GLGRNAAQWL LEAGHEVYAI GRDQLAGEEL RKLGATFIPL DLTMTTMEVC QQWLKTCDVV WHCAAKSAPW GNPQDFHQTN VVVTHKLAQA AGREGVKRFI HISSPAVYFD FRHHHDLPET YRASRFSSHY ASSKYAAEQV LHECIAHYPD TTYVILRPRG LFGPHDRVIV PRLLQQLSRD RNVLRLPGGG QAQLDLTFVL NVVHAMMLAT DNDGLRSGAI YNITNQEPQR LVTMLDSLLN QQLHINYTLQ PVPYSLLSVV AAGMELVASM TQKEPLLTRY SVGAVYFDMT LNSERAVNEL GYRPRYSMAE GIVLAGEWLS AQRSGQHG
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