Gene YpsIP31758_2082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2082 
Symbol 
ID5386685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2392640 
End bp2393629 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content48% 
IMG OID640865068 
Producthypothetical protein 
Protein accessionYP_001401055 
Protein GI153948257 
COG category[R] General function prediction only 
COG ID[COG1073] Hydrolases of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.0227342 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGCCG ATTATAAATT AAATCCATTT ACACTGACTT ATGACGGCGC GATTACCGAA 
AACGTGAAAG GCAAAGTCAA TATTCATCCT GTTACTTATA AGCTAAATGG TTTGGAAATT
TCTGCCAACG TATATACCCC TGCGAATTAT GATCCCGCTA AAAAATACCC GGCCGTGGTG
GTGGCTCACC CCAATGGTGG CGTGAAAGAG CAGGTCGCTG GCTTGTATGC TCAGCGTTTG
GCAGAGCAAG GCTATATCAC CATTACTGCG GATGCCGCGT ATCAAGGCGC GAGTGGCGGC
TTGCCCCGCA ATGTCGACAA ACCCGCTTAC CGCATTGAAG ATATTCACGG CATGGCAGAC
TTTATTACCC AATATCCTGG GGTGGACACG GTCCGTTTAG GCCTGCTGGG TATTTGCGGC
GGTGGGGGCT ACTCCTTGAA AGCCGGGCAA ACCGACAAGC GCTTCAGCGC GATTGCCACG
TTGAGCATGT TTGATTCCGG TCTGGTAAGA CGCAACGGTT ATCAGGACTC ACAACTTTCC
ACAATACAAG AACGTTTAAA ACAAGCCTCT GATGCACGAG CACAGGAAGC TGCTGGTGGA
GAGGTTACTT ACGTTGGGGA TGCCAAACTG ACTGATGAGC AAATTGCCAA ACTGCCGTTT
GACCTTTATC GGCAGGGTTT TGAGTACTAC GGTAAAACGC ATGCTCACCC CAATTCAACC
TTCAGATACA CCGCCAGCAG TCTGCTCGAC TTAATGAGAT TCGATGCGGC AAGCAATATG
GATTTAATCG ATAAACCGCT ACTGATGATG GCAGGCAGTA AAGCCGATTC CCTGTATATG
AGCGAAACAG CGTTTAAAGG TGCTAGCAAC GCAAAAGATA AGGAACTGTT CCTGATTGAT
GGTGCGACCC ACATTGAAAC CTATTGGCAG CCGGAATATG TGAATCAGGC TATAGGTAAA
TTGGCTCAGT TCTACGGGAA AAATTTATAA
 
Protein sequence
MSADYKLNPF TLTYDGAITE NVKGKVNIHP VTYKLNGLEI SANVYTPANY DPAKKYPAVV 
VAHPNGGVKE QVAGLYAQRL AEQGYITITA DAAYQGASGG LPRNVDKPAY RIEDIHGMAD
FITQYPGVDT VRLGLLGICG GGGYSLKAGQ TDKRFSAIAT LSMFDSGLVR RNGYQDSQLS
TIQERLKQAS DARAQEAAGG EVTYVGDAKL TDEQIAKLPF DLYRQGFEYY GKTHAHPNST
FRYTASSLLD LMRFDAASNM DLIDKPLLMM AGSKADSLYM SETAFKGASN AKDKELFLID
GATHIETYWQ PEYVNQAIGK LAQFYGKNL