Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2076 |
Symbol | |
ID | 5388166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 2388935 |
End bp | 2389333 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640865062 |
Product | IS3 family transposase orfA |
Protein accession | YP_001401049 |
Protein GI | 153947546 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.045184 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCAAT ATGTTAAACG CACGCAACGC GATTACCCTC TATCCTTTAA ATTGACCGTT GTCCAACAGG TCGAAAAAGG TGAAATGACT TACCGCCAGG CGCAAGACCG TTACGGTATT CAAGGCTGCT CTACCGTCTT GAAGTGGCTA CGCAAGTACG GTCAACTCGA CTGGTCTTCC CCCTCTTCTA CAAGAACGTG CAGAGCTAAC ATGCCTAAAA TGCCTCTTAC TCCCGAACAG CGAATTAAAG AACTTGAACA GCAACTCGCT GAATCAGAAG TCAAAGCTCA TTTTTTTGAA GCTGTTGTGA AGGTAATGAA CACGGAGTTC GGAGCCACAC TAACAAAAAA GCAGTTGGCC ACATTATCAC GCAAGCACAA ACGCAAGGAC TCACAGTAA
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Protein sequence | MNQYVKRTQR DYPLSFKLTV VQQVEKGEMT YRQAQDRYGI QGCSTVLKWL RKYGQLDWSS PSSTRTCRAN MPKMPLTPEQ RIKELEQQLA ESEVKAHFFE AVVKVMNTEF GATLTKKQLA TLSRKHKRKD SQ
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