Gene YpsIP31758_2074 details

Gene Information

• Locus tag: YpsIP31758_2074
• Symbol: pth
• ID: 5387641
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: +
• Start bp: 2386876
• End bp: 2387466
• Gene Length: 591 bp
• Protein Length: 196 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640865060
• Product: peptidyl-tRNA hydrolase
• Protein accession: YP_001401047
• Protein GI: 153950891
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0193] Peptidyl-tRNA hydrolase
• TIGRFAM ID: [TIGR00447] peptidyl-tRNA hydrolase

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 0.0225311
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGTAGCA TTAAATTAAT CGTTGGGCTG GCAAATCCGG GCGCAGAATA TGCCCAAACC 
CGCCATAATG CGGGAGCCTG GTATGTAGAT TTATTGGCTG AACGCCACAA TCAGTCCCTG 
AAAGAAGAGA GTAAATTCTT TGGTTATACC GCACGGTTAA ATCTGGCAGG CCAAGATATC 
CGTTTATTGG TACCCGCCAC GTTTATGAAT CTCAGTGGTA AAGCCGTCGC GGCAATGGCC 
AGTTTTTACC GCATTCTGCC GGAAGAGATT CTAGTCGCCC ACGATGAGCT GGATATTTTA 
CCGGGGATGG CAAAATTAAA ACTGGGAGGA GGCAACGGCG GCCATAATGG TCTGAAAGAC 
ATTCAGAACA AATTAGGTAA TAACCCTAAT TTTTACCGCT TACGTATCGG TATTGGTCAT 
CCTGGTGATA AAAGCAAAGT CACTGGCTTT GTTTTGGGTA AACCCCCCGC TAGCGAACAA 
ACGTTGATAG ACAATGCCAT TGACGAGTCT ATCCGCTGCA CTGAAGTGCT ACTCAATGAA 
GGCATGACCA AAGCAATGAA CCGCCTGCAC GCTTTTAAGG CCAGCGCATA A 

 

Protein sequence

MSSIKLIVGL ANPGAEYAQT RHNAGAWYVD LLAERHNQSL KEESKFFGYT ARLNLAGQDI 
RLLVPATFMN LSGKAVAAMA SFYRILPEEI LVAHDELDIL PGMAKLKLGG GNGGHNGLKD 
IQNKLGNNPN FYRLRIGIGH PGDKSKVTGF VLGKPPASEQ TLIDNAIDES IRCTEVLLNE 
GMTKAMNRLH AFKASA