| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2069 |
|---|
| Symbol | ipk |
|---|
| ID | 5386125 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 2383853 |
|---|
| End bp | 2384752 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640865055 |
|---|
| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
|---|
| Protein accession | YP_001401042 |
|---|
| Protein GI | 153948030 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0000000305263 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTACCG CGAATCAACC TATATGTCCG TCACCAGCAA AATGGCCGTC ACCGGCAAAA
TTGAATTTGT TTCTTTATAT CACCGGGCAA CGCGCCGACG GCTATCATCA GTTACAAACG
CTGTTTCAAT TTCTTGATTA TGGTGATCAA CTGACGATTG AACCGCGCGA TGACAACCAA
ATTCGCTTAT TAACCCCCAT AGCAGGGGTG GAAAATGAGC AAAACCTGAT CGTCCGCGCG
GCAAAAATGC TGCAAAAACA CCCTGGCAAT ACCCCCGTGC CACGCGGTGC TGATATCAGC
ATTGATAAAT GTTTACCGAT GGGCGGTGGA TTGGGGGGCG GTTCGTCTAA TGCAGCCACA
GTCTTGGTGG CACTCAACCT ACTGTGGCAA TGTGGTTTAA CTGATGAACA ATTAGCCGAT
CTCGGACTAA CATTAGGGGC TGATGTCCCG GTATTTGTTC GGGGCCATGC CGCCTTCGCA
GAGGGTATTG GTGAAAAATT ACAGCCAGCA GAGCCTGTAG AGAAGTGGTA TTTGGTCATA
CACCCCGGTG TAAACATCCC AACACCGATT ATTTTTTCTG ATCCTGAATT AAAAAGAAAT
ACGCCAATCC GCCCACTGGC GGCGCTTTTA AGCACTCCAT ACGCAAATGA TTGCGAACCG
ATCGCAAGAA AACGTTTTCG CGAGGTTGAA CAGGCTCTTT CATGGCTGTT AGAATACGCC
CCGTCACGCC TTACCGGTAC CGGCGCTTGT GTGTTTGCAG AATTCGACAC GGAGTCATCG
GCCCGGCAGG TGTTAAGTAT TGCCCCTGAG TGGTTACATG GTTTTGTCGC CCGTGGTGTA
AATGTTTCAC CATTGCATCG TGTACGCTCA GGGAAAATTG AAAGCAGTGA GCGCAGATAA
|
|---|
| Protein sequence | MTTANQPICP SPAKWPSPAK LNLFLYITGQ RADGYHQLQT LFQFLDYGDQ LTIEPRDDNQ
IRLLTPIAGV ENEQNLIVRA AKMLQKHPGN TPVPRGADIS IDKCLPMGGG LGGGSSNAAT
VLVALNLLWQ CGLTDEQLAD LGLTLGADVP VFVRGHAAFA EGIGEKLQPA EPVEKWYLVI
HPGVNIPTPI IFSDPELKRN TPIRPLAALL STPYANDCEP IARKRFREVE QALSWLLEYA
PSRLTGTGAC VFAEFDTESS ARQVLSIAPE WLHGFVARGV NVSPLHRVRS GKIESSERR
|
|---|
| |