Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2064 |
Symbol | |
ID | 5385198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 2379250 |
End bp | 2379651 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640865050 |
Product | sirB family protein |
Protein accession | YP_001401037 |
Protein GI | 153948495 |
COG category | [S] Function unknown |
COG ID | [COG3094] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0000433498 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGGTTG ATTACATCGC CATGAAATAT TTGCATTTAC TCACCGTGGT GATCAGCATT ACTCTGTTTG TACTACGTTT CTTCTGGAAA TGTCGCGGCT CAGCGATGCT TGAAAAGCGT TGGGTAAAGA TAACGCCGCA CATCAATGAT ACGCTGCTGT TTATCAGTGG TATTGTGCTG ATATTGATTA CTGGATTCTA TCCATTCAGT CCGCAGGGAA CATGGCTGAC TGAGAAGCTG TTTGGCGTTA TTATCTACAT CCTGCTTGGC TATGTTGCAT TAGGTAAGCG AACTCGCAGC CAGAATATTC GCTGGTTTGC CTTTATACTC GCACTGGGTT GCCTGTATCT AATTGTAAAA CTGGCAACAA CTAAATTACC ACTGCTGATG GGATATCTAT GA
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Protein sequence | MWVDYIAMKY LHLLTVVISI TLFVLRFFWK CRGSAMLEKR WVKITPHIND TLLFISGIVL ILITGFYPFS PQGTWLTEKL FGVIIYILLG YVALGKRTRS QNIRWFAFIL ALGCLYLIVK LATTKLPLLM GYL
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