Gene YpsIP31758_2064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2064 
Symbol 
ID5385198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2379250 
End bp2379651 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content43% 
IMG OID640865050 
ProductsirB family protein 
Protein accessionYP_001401037 
Protein GI153948495 
COG category[S] Function unknown 
COG ID[COG3094] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0000433498 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGGTTG ATTACATCGC CATGAAATAT TTGCATTTAC TCACCGTGGT GATCAGCATT 
ACTCTGTTTG TACTACGTTT CTTCTGGAAA TGTCGCGGCT CAGCGATGCT TGAAAAGCGT
TGGGTAAAGA TAACGCCGCA CATCAATGAT ACGCTGCTGT TTATCAGTGG TATTGTGCTG
ATATTGATTA CTGGATTCTA TCCATTCAGT CCGCAGGGAA CATGGCTGAC TGAGAAGCTG
TTTGGCGTTA TTATCTACAT CCTGCTTGGC TATGTTGCAT TAGGTAAGCG AACTCGCAGC
CAGAATATTC GCTGGTTTGC CTTTATACTC GCACTGGGTT GCCTGTATCT AATTGTAAAA
CTGGCAACAA CTAAATTACC ACTGCTGATG GGATATCTAT GA
 
Protein sequence
MWVDYIAMKY LHLLTVVISI TLFVLRFFWK CRGSAMLEKR WVKITPHIND TLLFISGIVL 
ILITGFYPFS PQGTWLTEKL FGVIIYILLG YVALGKRTRS QNIRWFAFIL ALGCLYLIVK
LATTKLPLLM GYL