Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2060 |
Symbol | |
ID | 5387382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 2373494 |
End bp | 2374369 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640865045 |
Product | glycerophosphoryl diester phosphodiesterase family protein |
Protein accession | YP_001401033 |
Protein GI | 153947238 |
COG category | [C] Energy production and conversion |
COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 0.804803 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATA AAAAAAATTA TCTTATTTCT CTATTATTCA CTGTTTACTT CACCTCAGCC ACTGCCTCCC CACTGATTGT GGCACACAGA GCTGGCACTG CAGATTATCC AGAAAATACG GTGCATGCCA TTAGTATGGC AATAAAGAAT CAGGCGGATG TTATTTGGCT TTCCATCCAA CTTACTCGCG ACGGTATTCC GGTGCTGTAC CGCCCTAGTG ATCTTAAAAG CCTTACTAAT AGTGAGGGCC TTATTTCAGA ACACTCTTTA TTGGAAATAA AAATGCTAGA TGCTGCTCAT TTTTTTAAGA CCGAAGGCCA GTATTTTTAC CGTGGGCGAG GGATGAAAAT TCCTTCGTTG CAAGATGTCT TCACCCGATT CCCCAAAAAC CACTTCATCC TCGACATCAA ATCACCCGAC GCCGATCCCG TCATCATGGC AAATATATTA TCAACGCTGA TCACCAGTAA TAACCTGCTT GATAAGGTCA CTCTCTATTC CACGGACAGA AAGTATTTGG ATGCTTTACC TGATAGCATT AATAAATTTG AAAACCGTCA TGTGACACGA AAAATACTGA CCAACGCGGT CATGGCAAAC GACTGTAAAA TCTCCGCTAA ACGAGATAAA ACGCAATATC ATGCATTTGA ATTAAGGCGT GAGGTGAAAG TCGTTGAAAA ATTCACCCTC GGCAAAGGGG CTTCGCGCGC ACAACTCGTC TGGAATCAGC AAGCCATGGA CTGTTTTAAG AAAAATAGTA ACAGCAAGAT TCTGCTCATT GGTATAAATT CTGCTGAGGA TTATCAGCTC GCCAAGGATC TAGGAGCGGA TTATGTGATG ACTGACTCCC CCGCCACCGC CAAAAATTGG CGTTAA
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Protein sequence | MKNKKNYLIS LLFTVYFTSA TASPLIVAHR AGTADYPENT VHAISMAIKN QADVIWLSIQ LTRDGIPVLY RPSDLKSLTN SEGLISEHSL LEIKMLDAAH FFKTEGQYFY RGRGMKIPSL QDVFTRFPKN HFILDIKSPD ADPVIMANIL STLITSNNLL DKVTLYSTDR KYLDALPDSI NKFENRHVTR KILTNAVMAN DCKISAKRDK TQYHAFELRR EVKVVEKFTL GKGASRAQLV WNQQAMDCFK KNSNSKILLI GINSAEDYQL AKDLGADYVM TDSPATAKNW R
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