| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2056 |
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| Symbol | |
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| ID | 5388305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 2369328 |
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| End bp | 2370395 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640865041 |
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| Product | putative spermidine/putrescine ABC transporter, ATP-binding protein |
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| Protein accession | YP_001401029 |
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| Protein GI | 153947691 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 0.938805 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGAAAC TGGTACTGGA GCAGGTGACC AAAACATTTG GCGATTTCTA CGCCGCCAGG
GAAATATCTT TTTGCGCTGA AGAAGGCGAG TTCGTAACGC TGCTAGGGCC AAGTGGCTGC
GGCAAAACGA CACTGCTGAA GATGATCGGT GGCTTTCACC AGCCGGATAG CGGGCAGATC
CTGATTGGGG GGAAATCGGT CAACAGCCTA CCGCCAGATA AACGTAATAC CGCCATGTGC
TTCCAGTCCT ACGCCTTGTT CCCGCATCTC AACGTGTCGC ATAACATCTG TTTCGGGCTG
AAGCAGAAAA AAGTCGCTAT CAATGAGCAA TTGGCGCGAC TGGCAGAGGC ACTGAAGCAG
GTGGGGCTAG AAAGCCAACG CCTGAAAATG CCCGCCCAAC TCTCCGGCGG CCAGCAGCAG
CGCGTGGCAC TGGCCCGAGC GATGATCACC CGCCCAGACG TGATCCTGTT TGATGAACCG
CTCTCTAATC TTGATGCTAA ACTGCGCGAA AGCGTGCGTT TTGAGATTAA AGAACTGCAA
CGTCAGTACC ATCTCACCTC TATTTACGTC ACCCATGATC AGGCAGAAGC GCTGGCGATG
TCGGACAAAA TCGTGGTGCT CAACGCAGGT AATGTGGAGC AAATCGGGGC ACCTGAGGAG
ATTTACTACC GCCCGACCAG CCGCTTTGTG GCGGATTTCA TCGGCGCGGC CAATATCGAC
ACAGCTCATA TTACTGCTGC AGAGCAACCC GGCTCTTGGC GAGTACGCTG CGCCATGGGC
GAATTTTACG TCCATTCAAC CACTCCGCCG CGTGCAGAGC ACTGCTATAT CTGCTGGCGG
CCGGAAGATG TGCAATTTGT CGGCCCTCAT CAGAGCGGCG ACAACCACTT TACCCTGACA
CTCGAAAAAA TGGCGTTTAT GGGCAATCTC ACTGAGGCCT GGGGCCATAA TGATGCGGGG
CTGTCGGTAC GTCTGCAACT GATTAAAAAA CCTCCGGTGG CACTTGGCGG GCGGGCGTGT
TTCCGCCTGC CGGAGAACGC TATTCACTTT TTGGAGCCGG TATCATGA
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| Protein sequence | MSKLVLEQVT KTFGDFYAAR EISFCAEEGE FVTLLGPSGC GKTTLLKMIG GFHQPDSGQI
LIGGKSVNSL PPDKRNTAMC FQSYALFPHL NVSHNICFGL KQKKVAINEQ LARLAEALKQ
VGLESQRLKM PAQLSGGQQQ RVALARAMIT RPDVILFDEP LSNLDAKLRE SVRFEIKELQ
RQYHLTSIYV THDQAEALAM SDKIVVLNAG NVEQIGAPEE IYYRPTSRFV ADFIGAANID
TAHITAAEQP GSWRVRCAMG EFYVHSTTPP RAEHCYICWR PEDVQFVGPH QSGDNHFTLT
LEKMAFMGNL TEAWGHNDAG LSVRLQLIKK PPVALGGRAC FRLPENAIHF LEPVS
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