Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2050 |
Symbol | |
ID | 5384699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 2362600 |
End bp | 2363805 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640865034 |
Product | multidrug resistance protein MdtH |
Protein accession | YP_001401023 |
Protein GI | 153949215 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTTTGG TATCGCAAGC TCGAAGCTTG GGTAAGTATT TTTTATTGTT TGATAATTTA TTAGTTGTGT TGGGATTTTT TGTCGTATTC CCGCTCATTT CTATCCGATT TGTCGATCAA TTAGGTTGGG CTGCGTTGGT CGTGGGCCTT GCTTTAGGCC TAAGGCAATT GGTTCAACAA GGATTGGGGA TCTTTGGCGG AGCCATTGCC GACCGGTTCG GTGCCAAACC GATGATTGTC ACCGGGATGC TAATGCGAGC CGCGGGTTTT GCCTTGATGG CCATGGCGGA TGAACCTTGG ATACTTTGGC TGGCCTGTGC GCTGTCAGGG CTGGGCGGCA CCCTGTTTGA TCCACCACGC ACAGCGTTGG TCATCAAGTT GACCCGCCCC CATGAACGAG GCCGTTTTTA TTCGCTGCTA ATGATGCAGG ATAGCGCCGG AGCGGTAATT GGTGCGTTGA TTGGCAGTTG GCTGCTGCAA TATGACTTCC ACTTCGTCTG TTGGACCGGT GCGGCTATTT TTGTGCTGGC AGCCGGTTGG AACGCCTGGT TACTCCCCGC TTACCGTATC TCGACCGTTC GCGCCCCGAT GAAAGAAGGC CTGATGCGAG TGTTGCGTGA TCGCCGTTTT GTGACCTATG TGCTGACGCT CACTGGCTAT TATATGCTCG CCGTACAGGT CATGCTGATG CTGCCGATCG TGGTGAATGA ACTTGCTGGC TCACCGGCCG CAGTTAAATG GATGTATGCC ATTGAAGCCG CACTTTCTCT GACGCTGCTT TATCCGCTGG CCCGTTGGAG TGAAAAGCGT TTTAGCCTTG AGCAACGCTT AATGGCCGGC TTACTGATCA TGACGCTCAG TTTGTTCCCC ATCGGGATGA TCACTCATCT ACAAACACTG TTCATGTTTA TCTGTTTCTT CTATATGGGA TCAATCCTCG CTGAACCCGC CCGTGAAACG CTGGGAGCAT CGCTGGCTGA CTCCCGCGCC CGTGGTAGCT ATATGGGCTT TAGTCGCCTT GGATTAGCGC TGGGGGGGGC ATTAGGTTAT ACCGGCGGTG GCTGGATGTA CGATACCGGC AAAACCCTTG ATATGCCTGA GCTACCCTGG TTCTTGCTGG GTATTATTGG ACTCATTACA TTGGCAGGGC TTTACTGGCA ATTCAATCGA CGGCGGATTG AATCTGCCAT GTTGAGCAGC AGCTAA
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Protein sequence | MALVSQARSL GKYFLLFDNL LVVLGFFVVF PLISIRFVDQ LGWAALVVGL ALGLRQLVQQ GLGIFGGAIA DRFGAKPMIV TGMLMRAAGF ALMAMADEPW ILWLACALSG LGGTLFDPPR TALVIKLTRP HERGRFYSLL MMQDSAGAVI GALIGSWLLQ YDFHFVCWTG AAIFVLAAGW NAWLLPAYRI STVRAPMKEG LMRVLRDRRF VTYVLTLTGY YMLAVQVMLM LPIVVNELAG SPAAVKWMYA IEAALSLTLL YPLARWSEKR FSLEQRLMAG LLIMTLSLFP IGMITHLQTL FMFICFFYMG SILAEPARET LGASLADSRA RGSYMGFSRL GLALGGALGY TGGGWMYDTG KTLDMPELPW FLLGIIGLIT LAGLYWQFNR RRIESAMLSS S
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