Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2048 |
Symbol | |
ID | 5385675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 2361013 |
End bp | 2361714 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640865032 |
Product | hypothetical protein |
Protein accession | YP_001401021 |
Protein GI | 153950167 |
COG category | [S] Function unknown |
COG ID | [COG3132] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACACA ACTTAAATGC ACATGAAGCC CGTGTTATCG GCTGTTTATT GGAAAAACAA GTGACAACAC CGGAACAATA TCCGATGTCA CTCAATGGAC TCACTCTCGC TTGTAATCAA AAAACCAGCC GTGATCCTGT AATGGAATTA TCCGAATCAC AAGTACAACA AACGTTAGAT TTTCTCCTTA AAAAACACCT TATCCGCAGC CAAAGTGGTA ATCGGGTAAT GAAGTACGAA CATCGTTTTT GCAATTCTGA ATTTGGCGAC CTGAAATTTT CACCCGCCGA GGTCGCGGTG ATTACCCTGC TATTATTACG TGGCGCACAA ACACCGGGGG AGCTACGCAC CCGAACTAAC CGGATGTATG AATTTGCTGA TGTTGCAGAA ACCGAAGAAA CCTTGAAGAC GCTCTCTCTA CGTGAAGACG GGCCATTTGT GGTGCGTTTG GCACGGGAAC CGGGTAAACG CGAAAGTCGC TTTATGCCTC TGTTTAGTGG GGACGTTGCT TCGTCATTAT TGGCAGCGGG AGAGGCTGAA GAGAATAACC ACACCCTTGA AGCCAACCCC CGTGAAACGC ATTCCTTTGA AAATATAGCC CTTGAAAAAA CAGCCCTTGA AGCTAGGGTT GCCCAGCTTG AACAGCAGGT TATCCAGTTG TCACGCCGTT TGGACGACGT GTTGATTCAA CTGGATGATT GA
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Protein sequence | MKHNLNAHEA RVIGCLLEKQ VTTPEQYPMS LNGLTLACNQ KTSRDPVMEL SESQVQQTLD FLLKKHLIRS QSGNRVMKYE HRFCNSEFGD LKFSPAEVAV ITLLLLRGAQ TPGELRTRTN RMYEFADVAE TEETLKTLSL REDGPFVVRL AREPGKRESR FMPLFSGDVA SSLLAAGEAE ENNHTLEANP RETHSFENIA LEKTALEARV AQLEQQVIQL SRRLDDVLIQ LDD
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