Gene YpsIP31758_2048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2048 
Symbol 
ID5385675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2361013 
End bp2361714 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content47% 
IMG OID640865032 
Producthypothetical protein 
Protein accessionYP_001401021 
Protein GI153950167 
COG category[S] Function unknown 
COG ID[COG3132] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACACA ACTTAAATGC ACATGAAGCC CGTGTTATCG GCTGTTTATT GGAAAAACAA 
GTGACAACAC CGGAACAATA TCCGATGTCA CTCAATGGAC TCACTCTCGC TTGTAATCAA
AAAACCAGCC GTGATCCTGT AATGGAATTA TCCGAATCAC AAGTACAACA AACGTTAGAT
TTTCTCCTTA AAAAACACCT TATCCGCAGC CAAAGTGGTA ATCGGGTAAT GAAGTACGAA
CATCGTTTTT GCAATTCTGA ATTTGGCGAC CTGAAATTTT CACCCGCCGA GGTCGCGGTG
ATTACCCTGC TATTATTACG TGGCGCACAA ACACCGGGGG AGCTACGCAC CCGAACTAAC
CGGATGTATG AATTTGCTGA TGTTGCAGAA ACCGAAGAAA CCTTGAAGAC GCTCTCTCTA
CGTGAAGACG GGCCATTTGT GGTGCGTTTG GCACGGGAAC CGGGTAAACG CGAAAGTCGC
TTTATGCCTC TGTTTAGTGG GGACGTTGCT TCGTCATTAT TGGCAGCGGG AGAGGCTGAA
GAGAATAACC ACACCCTTGA AGCCAACCCC CGTGAAACGC ATTCCTTTGA AAATATAGCC
CTTGAAAAAA CAGCCCTTGA AGCTAGGGTT GCCCAGCTTG AACAGCAGGT TATCCAGTTG
TCACGCCGTT TGGACGACGT GTTGATTCAA CTGGATGATT GA
 
Protein sequence
MKHNLNAHEA RVIGCLLEKQ VTTPEQYPMS LNGLTLACNQ KTSRDPVMEL SESQVQQTLD 
FLLKKHLIRS QSGNRVMKYE HRFCNSEFGD LKFSPAEVAV ITLLLLRGAQ TPGELRTRTN
RMYEFADVAE TEETLKTLSL REDGPFVVRL AREPGKRESR FMPLFSGDVA SSLLAAGEAE
ENNHTLEANP RETHSFENIA LEKTALEARV AQLEQQVIQL SRRLDDVLIQ LDD