| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2045 |
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| Symbol | |
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| ID | 5386015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 2356255 |
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| End bp | 2357796 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640865029 |
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| Product | ShlB/FhaC/HecB family haemolysin secretion/activation protein |
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| Protein accession | YP_001401018 |
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| Protein GI | 153947255 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.102664 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCATG AATATAAAGA AAAACGCAAC AAAGTCGGGA AACATTTCTT ATCTACAAAC
CGTCATGAGG CAGCATCATA TGAAAAAAAT GCTCCAGAGA AAATATGCTT ACCAATAACG
GGAGTGTTTC TACAAGGGAA TACACTGCTG TCATTACCAG ATTTAAATAA GCTAGATGAT
GTCCTTGGTG AATGTATTAG TGAAAGTGAT ATTAATGCCT TAGCTAAGGA AGTTACCAGA
TCATATCTGG ATAAAGGTTA TTTGGCCGCC AGAGTCAATT TCATTCCATT AAATAGCTTG
GGGCAACTGG GATTAAATGT GACTGAAGGT ATTGTTGAAA GAATTGAAGG TGGCGACAAA
AGAACTAATC CCCATTTTTT GTTTCCTAAT TTTATCAATA ATCCCCTTAG ATTATCCGAA
CTTGACCAAG GCATTGATCA GGCCAATAGA TTGCGTTCAA ATAGAATGAG CGTTGATATT
TTATCAGGGA GTCAGGCCGG TAAATCAATT ATTAGAATAA ATAATGCCAA TAATAAACCC
TGGAGTTTAT CTACCGTCAT TGATAATTAT GGTTATAAAA ATTCTGATGA GTGGCAAGCG
AGAGTATCAC TAGCCTTAGA TAGCCCATTT GGGCTATCTG ACGCTATCAG TTTTAATACT
AACCGAACGC TGGAAAATGC TAAAAAACGC TACAAGAATG ATTTTACTGC TTCTTATTCG
GTACCTTATG GTGCATTAAC TGTCAGTGCC CTTGTTAATC ATCTGGAGTA CCGGCGTTAT
GAGAAATTAA AAAATGGGAT AGTGAATTTT AATGGTAACT CACAGCAGTA TAACTTCCGT
ACTGATTATA TGTTTCATCG TACACAGAAG CAGATAAATA ATTTAAATGT GCAATTAGAG
CATAAGCAAA TTGATAATTA TCTCTATAAC ACAAAAATAG GCGTAAATAG TTACAGGTTT
ACCGCTATTG AACTGGGTCT CAATCAATTT CGTGTTCTTC CTCATGGCTC AGTGAATATT
AATGCGACAA TAAAAAGAGG TGTGCCATGG TTTGGTACTC GTCAGGAAAA TAAAATAAAC
ACAGTGCAAT TTACCACAGG GAAATTGATG GTTAATTTTA ATCACAATTT CTCTCTATTA
AATTCTCCGT ATCAATTTGA TCATGTACTA GTCGGACAAT ACAGTAAAAA TCACGCACCT
TCTCCTGAAT GGATAAGTTT GACTGAACGT AATGCCATTA GAGGATTTAG TCGTAGTTCG
CAATCAGCAG ATAACGGTTG GTATATAAAA AATACGTTAT CCCGCCACTT CTTTATGGGG
AATGTGCTTT TTACCCCTCG TATTGGCATT GATGCTGGGC GTGCTTTAAG ACAAGACAGC
CAACAAGGGT GGCAAAGTAA TGCGGGTGTG AGTGCCGGTA TATCCATGCG CTATCACCAA
GCATTATTTG ATGTGGAAGC CAGCCGTGGT TGGTGGTTTT CCGATAGTAA TAAACAGAAC
GAACCTGTAC AGGTATTGGG CCGTATAGCT TATACCTTCT AA
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| Protein sequence | MRHEYKEKRN KVGKHFLSTN RHEAASYEKN APEKICLPIT GVFLQGNTLL SLPDLNKLDD
VLGECISESD INALAKEVTR SYLDKGYLAA RVNFIPLNSL GQLGLNVTEG IVERIEGGDK
RTNPHFLFPN FINNPLRLSE LDQGIDQANR LRSNRMSVDI LSGSQAGKSI IRINNANNKP
WSLSTVIDNY GYKNSDEWQA RVSLALDSPF GLSDAISFNT NRTLENAKKR YKNDFTASYS
VPYGALTVSA LVNHLEYRRY EKLKNGIVNF NGNSQQYNFR TDYMFHRTQK QINNLNVQLE
HKQIDNYLYN TKIGVNSYRF TAIELGLNQF RVLPHGSVNI NATIKRGVPW FGTRQENKIN
TVQFTTGKLM VNFNHNFSLL NSPYQFDHVL VGQYSKNHAP SPEWISLTER NAIRGFSRSS
QSADNGWYIK NTLSRHFFMG NVLFTPRIGI DAGRALRQDS QQGWQSNAGV SAGISMRYHQ
ALFDVEASRG WWFSDSNKQN EPVQVLGRIA YTF
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