| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2040 |
|---|
| Symbol | cutC |
|---|
| ID | 5384421 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 2347350 |
|---|
| End bp | 2348114 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640865024 |
|---|
| Product | copper homeostasis protein CutC |
|---|
| Protein accession | YP_001401013 |
|---|
| Protein GI | 153947848 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3142] Uncharacterized protein involved in copper resistance |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 52 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTAAAT TGGAAGTTTG TTGCTATAGC GTTGATTGTG CACAAATAGC AGAAAAGGCA
GGAGCCGACC GGGTTGAATT GTGCTGTGGT CAGTCTGAAG GGGGTTTGAC GCCGAGTGTC
GGCGCATTAA TACAGGCCAG AGAAACCGTG ACTATCCCGG TTCATCCGAT AGTTCGGCCA
CGTGGTGGTG ATTTTTGTTA CAGCAGCAAT GATTTTACTA TTATGAAAAA TGATATTGCG
CGGATCCGTG ACTTGGGCTT TGCTGGCGTC GTCGTTGGCG TACTGGATAC GGATGGGCAT
ATCGATATGC CACGGATGCG GGAGATTATG TCAGTAAGTG GTTCACTGGC GGTAACCTTC
CATCGCGCAT TTGATATGTG CCAGAATCCA ATGATTGCCT TAAAGCAACT GGCTGAACTT
AATGTGGCGC GTATTTTAAC CTCAGGGCAG CAGCAAAATG CTGAATTGGG TTTAGCTCTG
TTGAAAGATT TGGTTGCAGC AACCAAGGAT CAAGGCCCGA TTATTATGGC AGGGGCCGGG
GTGCGGTTGA CGAATATGCA GAAGTTTATT GATGCAGGGA TTCGTGAATT ACACAGTTCT
GCCGGGCGGA CGGTGCCATC AACCATGCGA TACCGTAAAG CCGGGGTGAC GATGTGCGCC
GACAGTGATG TTGATGAGTT TTCTCACTAT TGTGTTGATG GTGAGGTCGT TGAAGCTATG
AAGAGTTTAT TGGTTATGGG GTCGCCTCTT GCCAAGCACA CCTAG
|
|---|
| Protein sequence | MTKLEVCCYS VDCAQIAEKA GADRVELCCG QSEGGLTPSV GALIQARETV TIPVHPIVRP
RGGDFCYSSN DFTIMKNDIA RIRDLGFAGV VVGVLDTDGH IDMPRMREIM SVSGSLAVTF
HRAFDMCQNP MIALKQLAEL NVARILTSGQ QQNAELGLAL LKDLVAATKD QGPIIMAGAG
VRLTNMQKFI DAGIRELHSS AGRTVPSTMR YRKAGVTMCA DSDVDEFSHY CVDGEVVEAM
KSLLVMGSPL AKHT
|
|---|
| |