Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2028 |
Symbol | znuC |
ID | 5384604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 2335379 |
End bp | 2336140 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640865012 |
Product | high-affinity zinc transporter ATPase |
Protein accession | YP_001401001 |
Protein GI | 153946931 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000000000463637 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCCCA TATTGGTAAC GCTTAATAAG ATATCCGTCA CTTTTGGCTC TCGCCGGGTA CTGAACGATA TTTCCCTTTC TCTGCGCCCA GGGAAAATCC TTACGCTGCT TGGGCCAAAT GGCGCAGGAA AATCCACACT GGTACGGGTG GTTCTTGGCC TTATTCCCCC AAGTAGTGGA TCTCTGGTTC GTGAGCCTGG CTTACGCATC GGTTATGTTC CGCAAAAATT GCATTTAGAT GCCACATTGC CCCTAACTGT CAGCCGCTTT ATGCGGCTAA AGCCGGGGGT GAAAAAAGCC GACATTCTGC CTGCACTCAC ACGGGTGCAG GCCGCTCATT TGCTGGATCA ACCCATGCAA AAGCTTTCGG GCGGTGAAAA TCAGCGTGTG CTCCTCGCCC GAGCCTTACT GAACCGTCCA CAGTTGCTGG TGTTGGATGA ACCAACGCAA GGGGTCGATG TCAATGGCCA GTTAGCGCTA TATGATTTAA TCGAACAACT ACGAAAAGAG TTAGGTTGTG CTGTGTTAAT GGTTTCCCAT GATTTGCATT TGGTGATGGC CAAAACTGAT GAAGTATTGT GCCTTAATCA ACATATCTGT TGTTCAGGCG CACCAGAGGT GGTTTCAACC CACCCCGAGT TTATTGCCAT GTTTGGTAAT CGTGGTGCCG AGCAGTTAGC CGTTTATCGT CATAACCATA ATCATCGTCA CGACTTGCAT GGAAAAATTA TTTTGAAAAA CAGCGGGAGC CGTGGCGCAT GA
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Protein sequence | MMPILVTLNK ISVTFGSRRV LNDISLSLRP GKILTLLGPN GAGKSTLVRV VLGLIPPSSG SLVREPGLRI GYVPQKLHLD ATLPLTVSRF MRLKPGVKKA DILPALTRVQ AAHLLDQPMQ KLSGGENQRV LLARALLNRP QLLVLDEPTQ GVDVNGQLAL YDLIEQLRKE LGCAVLMVSH DLHLVMAKTD EVLCLNQHIC CSGAPEVVST HPEFIAMFGN RGAEQLAVYR HNHNHRHDLH GKIILKNSGS RGA
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