Gene YpsIP31758_2025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2025 
SymbolmsbB 
ID5387782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand- 
Start bp2331784 
End bp2332746 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content47% 
IMG OID640865009 
Productlipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 
Protein accessionYP_001400998 
Protein GI153949557 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID[TIGR02208] lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00000149839 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACAAAG AAAAAAATGA CGCAACTGGT TTTATTCCGG TATTTCAGAA AACCTTCCTC 
CATCCGCGTT TCTGGGGGGT TTGGTTAGGT GCTGGAGCGA TTGCGGCGCT CGCTTATATT 
CCACCCAAAT TCCGTGATCC TTTATTAGCT GGCATAGGGC GTCTCGCTGG GAAATTTGCT 
AAAAGCGCCC GTCGTCGCGC TCGTATTAAT CTTCTTTATT GTATGCCTGA GTTACCCGAG 
TCTGAACGCG AACACATTAT TGACCAGATG TTTGCTACCG CAGCTCAACC GTTAATGATG 
ATGGCAGAAC TTTGTTTTCG TGATCCGAAA AAAGTGCTGA CTCGCGTGCA CTGGCATGGA 
CAGGAAATAC TGGATGAGCT GCAACAACAA GAGCGTAATG TTATTTTGTT GGTCCCCCAT 
GCCTGGTCCA TTGATATTCC GGCTATGCTG CTAGCGGAGC AGGGCAAGCC AGTTGCAGGT 
ATGTTCCATC ATCAACGTAA TCCATTGGTG GACTATCTAT GGAACAGTGC GCGTTTACAT 
TTCGGTGGTC GGATCCATGC CCGCGAAAGT GGCATCAAAC CTTTTATCAG TTCAGTACGC 
CAAGGATTCT GGGGTTACTA CTTACCTGAT GAAGATTATG GTCCTGAGCA AAGTGAATTT 
GTTGATTTCT TCGCGACCTA TAAGGCGACA TTACCGGCAA TAGGCCGTTT AATGAAAGTC 
TGCCGTGCGG CCATTGTACC GATGTTCCCT GTTTATAATT ATAGAGAGCA TCGTCTTGAT 
ATCTATATCC GTCCGCCAAT GGATGATTTG GCGGATGCTG ATGACGCCTA TATTGCCCGC 
CGGATGAATG AGGAAGTGGA GTTGTTGGTT AAGCCGAATC CAGAGCAATA TACATGGATC 
TTAAAGCTGT TAAAAACCCG GAAAGAGGGT GAAACCGAGC CCTATGTGCG CAAAGATCTT 
TAG
 
Protein sequence
MHKEKNDATG FIPVFQKTFL HPRFWGVWLG AGAIAALAYI PPKFRDPLLA GIGRLAGKFA 
KSARRRARIN LLYCMPELPE SEREHIIDQM FATAAQPLMM MAELCFRDPK KVLTRVHWHG 
QEILDELQQQ ERNVILLVPH AWSIDIPAML LAEQGKPVAG MFHHQRNPLV DYLWNSARLH 
FGGRIHARES GIKPFISSVR QGFWGYYLPD EDYGPEQSEF VDFFATYKAT LPAIGRLMKV 
CRAAIVPMFP VYNYREHRLD IYIRPPMDDL ADADDAYIAR RMNEEVELLV KPNPEQYTWI 
LKLLKTRKEG ETEPYVRKDL