Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2021 |
Symbol | eda |
ID | 5385427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 2326083 |
End bp | 2326724 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640865005 |
Product | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase |
Protein accession | YP_001400994 |
Protein GI | 153949904 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase |
TIGRFAM ID | [TIGR01182] Entner-Doudoroff aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 0.917749 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGCT GGAAAACGAG CGCAGAACAG ATTATGACCG CAGGTCCTGT TGTCCCGGTG ATCGTGATCA ATAAGCTCGA GCAAGCAGTA CCGTTGGCAA AAGCTCTGGT GGCAGGCGGT GTTCGCGTAC TGGAAGTGAC GTTGCGTACC CCTTGTGCTG TGGAGGCCAT CCGCGCGATT GCCAAAGAAG TTCCTGAGGC AATTATTGGT GCTGGAACCG TGCTTAACCC ACAACAACTG GCTGAAGTGG TTGAAGCTGG CGCTCAGTTT GCCATTAGCC CTGGCTTGAC TGATGAACTG CTTAAAGCGG CCTGCGAAGG GTCTATCCCA TTGATTCCAG GTATCAGCAC CGTTTCAGAA CTGATGCTGG GGATGAGCTA TGGTTTGCGT GAGTTTAAAT TCTTCCCAGC TGAAGCTAAC GGTGGTGTCA AAGCGTTGCA AGCCATTGGC GGCCCATTCT CGCAAGTCCG TTTCTGCCCA ACTGGCGGTA TCACACCAAA TAACTACCGT GATTATTTAG CACTGAAGAG TGTATTGTGC ATTGGTGGCT CATGGTTGGT TCCTGCTGAC GCGTTGGAGA GTGGTGACTA CGCGCGCATT ACTGAATTAG CGAAGCAAGC GGTTGAGGGT GCGACAGCAT AA
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Protein sequence | MKSWKTSAEQ IMTAGPVVPV IVINKLEQAV PLAKALVAGG VRVLEVTLRT PCAVEAIRAI AKEVPEAIIG AGTVLNPQQL AEVVEAGAQF AISPGLTDEL LKAACEGSIP LIPGISTVSE LMLGMSYGLR EFKFFPAEAN GGVKALQAIG GPFSQVRFCP TGGITPNNYR DYLALKSVLC IGGSWLVPAD ALESGDYARI TELAKQAVEG ATA
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