Gene YpsIP31758_2018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2018 
Symbol 
ID5385409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2324160 
End bp2324504 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content49% 
IMG OID640865002 
Productendoribonuclease L-PSP 
Protein accessionYP_001400991 
Protein GI153947150 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value0.711263 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATTG AGAGAATTAA TCCGGAGAAA CGTTGGTCAG ATGCTGTGAT ACACAACGAC 
ACTATCTATT ACACCAGCGT ACCTGAAAAT CTGGATGCCG ATATCACCGC CCAGACCGCC
AATACCCTGG CGGCCATTGA TATGATGCTG CACCAATTAG GCTCGGATAA AAGCCGGGTT
CTGGATGCCA CCATTTTCTT GGCCGATAAA GCTGACTTTG CGGGTATGAA TGCCGCTTGG
GATGCCTGGG TTGTTGACGG CAACGCGCCC GTTCGCTGTA CGGTCGAAGC CAAACTGATG
AATCCGGACT ATAAAGTCGA AATCAAAATC ATTGCTGCAA TATGA
 
Protein sequence
MSIERINPEK RWSDAVIHND TIYYTSVPEN LDADITAQTA NTLAAIDMML HQLGSDKSRV 
LDATIFLADK ADFAGMNAAW DAWVVDGNAP VRCTVEAKLM NPDYKVEIKI IAAI