| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2014 |
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| Symbol | fadD |
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| ID | 5386992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 2318282 |
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| End bp | 2319970 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640864998 |
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| Product | long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_001400987 |
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| Protein GI | 153950187 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00000000277435 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAAAAAG TATGGCTAAA GCGCTATCCG GCAGATGTCC CCGCAGAGAT TGATCCGGAC
CGCTATTCAT CTTTGATAGA AATGTTTGAG AACGCGGCGT TGCGTTATGC GGACCAACCC
GCATTTATTA ATATGGGCGA GGTCATGACT TTTCGTAAGC TGGAAGAGCG CAGCCGTGCT
TTTGCTGCCT ATCTACAGCA AGGTCTGGGG TTACAGAAAG GTGACCGTGT TGCACTGATG
ATGCCAAATT TACTGCAATA TCCTATCGCT TTGTTTGGTG TTCTGCGGGC AGGTATGATT
GTCGTGAATG TTAATCCGCT GTATACCCCG CGTGAACTTG AGCATCAACT TAGTGATAGC
GGAGCCGTGG CCATCGTTAT TGTTTCCAAC TTCGCCCACA CACTGGAAAA AGTTGTCTTT
AAAACCCAGG TCCGGCATGT GATTTTGACC CGAATGGGTG ATCAACTCTC GGCAGCAAAA
GGGACGTTGG TTAACTTCGT GGTGAAATAC ATTAAGCGTC TGGTGCCGAA GTACTATCTG
CCCGATGCCA TTTCATTTCG TACCGTATTG CAAAAAGGGC GTCGAATGCA ATACGTCAAA
CCGGATGTTA TCAACACGGA TACGGCATTC TTGCAATATA CCGGCGGGAC TACGGGTGTC
GCGAAAGGTG CCATATTGAC ACACCGCAAC ATGCAATCAA ATCTGGAACA GGCAAAAGCG
GCCTATGCAC CGTTGCTTCA ACCTGGCCGT GATTTGGTGG TCACGGCTCT GCCTCTCTAC
CATATCTTTG CATTGACGGT AAATTGCCTG CTATTTATCG AGTTGGGGGG GCGCAGTTTA
TTGATAACCA ACCCACGAGA TATCCCCGGT ATGGTTAAAG AACTGAGTCG TTATCCATTT
ACCGCGATAA CAGGGGTCAA TACGTTATTT AATGCATTAT TGAATAATGA AGAGTTTACC
CATTTGGATT TCTCCACCTT GCGCCTTTCG GTGGGCGGCG GTATGCCAGT GCAGAAAGCC
GTGGCCGAAA AGTGGGAAAC GCTGACGGGT AAGCATCTAC TGGAGGGTTA CGGTTTGACT
GAATGCTCAC CTTTAGTTAC CGGTAACCCT TATGATCTGA AACATTACAG CGGCAGTATT
GGTTTACCGG TACCTTCGAC AGATGTTCGG CTGCGCGATG ATGATGGCAA TGACGTAGAA
TTAGGCAAGC CGGGTGAACT ATGGGTGCGT GGGCCACAAG TTATGTTAGG CTATTGGCAG
CGGCCAGATG CCACGGATGA CGTCCTGAAA GACGGCTGGC TGGCGACAGG TGATATTGCG
ACGATGGATG AGGACGGTTT CTTGCGCATC GTTGACCGCA AGAAGGACAT GATTCTGGTT
TCTGGTTTTA ACGTCTACCC CAATGAGATT GAAGAGGTGG TAGCGTTACA TGCGAAAGTG
CTGGAGTCTG CTGTGATTGG CGTGCCTAAT GAGGTCTCCG GCGAGGCAGT AAAAGTCTTT
GTTGTTAAAA AAGATGCATC ACTGACACCT GAAGAATTAC TAACGCATTG CCGTCGCTAC
CTTACCGGGT ATAAAGTACC GAAAATTGTA GAGTTCCGTG ACGAATTGCC GAAGTCGAAT
GTGGGTAAAA TATTGCGCAG GGAACTACGT GACGAAGAAG TTAAGGTGGG TACGACAGAC
GCAGCTTAA
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| Protein sequence | MEKVWLKRYP ADVPAEIDPD RYSSLIEMFE NAALRYADQP AFINMGEVMT FRKLEERSRA
FAAYLQQGLG LQKGDRVALM MPNLLQYPIA LFGVLRAGMI VVNVNPLYTP RELEHQLSDS
GAVAIVIVSN FAHTLEKVVF KTQVRHVILT RMGDQLSAAK GTLVNFVVKY IKRLVPKYYL
PDAISFRTVL QKGRRMQYVK PDVINTDTAF LQYTGGTTGV AKGAILTHRN MQSNLEQAKA
AYAPLLQPGR DLVVTALPLY HIFALTVNCL LFIELGGRSL LITNPRDIPG MVKELSRYPF
TAITGVNTLF NALLNNEEFT HLDFSTLRLS VGGGMPVQKA VAEKWETLTG KHLLEGYGLT
ECSPLVTGNP YDLKHYSGSI GLPVPSTDVR LRDDDGNDVE LGKPGELWVR GPQVMLGYWQ
RPDATDDVLK DGWLATGDIA TMDEDGFLRI VDRKKDMILV SGFNVYPNEI EEVVALHAKV
LESAVIGVPN EVSGEAVKVF VVKKDASLTP EELLTHCRRY LTGYKVPKIV EFRDELPKSN
VGKILRRELR DEEVKVGTTD AA
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